RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 EPHX3Q9H6B9 360 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 KRT82Q9NSB4 513 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCNA-201ENST00000379143 IFNKQ9P0W0 207 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
PCNA-201ENST00000379143 PRKAG3Q9UGI9 489 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 C2orf16Q68DN1 1984 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 SLC38A8A6NNN8 435 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 F8VZ95 297 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 O00370 1275 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
PCNA-201ENST00000379143 MICAL2O94851 1124 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 RTN3O95197 1032 aaPredicted RBP12.62□□□□□ -0.39
PCNA-201ENST00000379143 GNA15P30679 374 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 BCAT1P54687 386 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 FIGNQ5HY92 759 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 NUP93Q8N1F7 819 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 GIPC2Q8TF65 315 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 MYRFLQ96LU7 910 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 EDEM3Q9BZQ6 932 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 UBXN6Q9BZV1 441 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 HCFC1R1Q9NWW0 138 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 COMMD8Q9NX08 183 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 AJAP1Q9UKB5 411 aaPredicted RBP12.62□□□□□ -0.39
PCNA-201ENST00000379143 TSPAN16Q9UKR8 245 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCNA-201ENST00000379143 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 NR2E1Q9Y466 385 aa12.62□□□□□ -0.39
PCNA-201ENST00000379143 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 SETSIPP0DME0 302 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 IL9P15248 144 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 FSHRP23945 695 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 CDC25CP30307 473 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 STAT1P42224 750 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 GPR15P49685 360 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 MAP3K7CLP57077 242 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 JAM2P57087 298 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 GOLGA7BQ2TAP0 167 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 SARM1Q6SZW1 724 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 CLEC20AQ6ZU45 233 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 GPR152Q8TDT2 470 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 ZNF606Q8WXB4 792 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 ACSF2Q96CM8 615 aaPredicted RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 SMOQ99835 787 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 XPO4Q9C0E2 1151 aaKnown RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 GPR88Q9GZN0 384 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 NLRC4Q9NPP4 1024 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 MAGED2Q9UNF1 606 aaPredicted RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 MRPS23Q9Y3D9 190 aaKnown RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 HCN4Q9Y3Q4 1203 aa12.61□□□□□ -0.39
PCNA-201ENST00000379143 ZFP37Q9Y6Q3 630 aaPredicted RBP12.61□□□□□ -0.39
PCNA-201ENST00000379143 DENND4AQ7Z401 1863 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 XPO1O14980 1071 aaKnown RBP12.6□□□□□ -0.39
PCNA-201ENST00000379143 EPHB6O15197 1021 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 CYP26A1O43174 497 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 THAP12O43422 761 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 MYL4P12829 197 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 HMGA1P17096 107 aaKnown RBP12.6□□□□□ -0.39
PCNA-201ENST00000379143 BRD2P25440 801 aaKnown RBP12.6□□□□□ -0.39
PCNA-201ENST00000379143 CLCN1P35523 988 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 SOX5P35711 763 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 PBX1P40424 430 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 PPP3CCP48454 512 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 PDE6CP51160 858 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 SDHAF4Q5VUM1 108 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 ZMIZ2Q8NF64 920 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 TFAP2BQ92481 460 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 TTLL2Q9BWV7 592 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 LRRC3Q9BY71 257 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 FBXO44Q9H4M3 255 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 ZMYM5Q9UJ78 669 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 CDH22Q9UJ99 828 aa12.6□□□□□ -0.39
PCNA-201ENST00000379143 ITIH6Q6UXX5 1313 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 SOBPA7XYQ1 873 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 M0QYV0 167 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 BEST1O76090 585 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 YWHAQP27348 245 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 GABRR2P28476 465 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 KRT9P35527 623 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 PLA2G4AP47712 749 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 SLC5A3P53794 718 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 NTHL1P78549 312 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 MTMR3Q13615 1198 aa12.59□□□□□ -0.39
PCNA-201ENST00000379143 PKDCCQ504Y2 493 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms