RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 CLCN1P35523 988 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 MAP3K7CLP57077 242 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 POLR2FP61218 127 aaKnown RBP19.84■□□□□ 0.77
SSU72-203ENST00000378725 RAPGEF1Q13905 1077 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 PKDCCQ504Y2 493 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 DENND5BQ6ZUT9 1274 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 TTC30AQ86WT1 665 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 NUP93Q8N1F7 819 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 TCEAL4Q96EI5 215 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 PCMTD1Q96MG8 357 aaPredicted RBP19.84■□□□□ 0.77
SSU72-203ENST00000378725 TTLL2Q9BWV7 592 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 PNPLA8Q9NP80 782 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 COMMD8Q9NX08 183 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 EHD2Q9NZN4 543 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 TSPAN16Q9UKR8 245 aa19.84■□□□□ 0.77
SSU72-203ENST00000378725 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.84■□□□□ 0.77
SSU72-203ENST00000378725 MRPS23Q9Y3D9 190 aaKnown RBP19.84■□□□□ 0.77
SSU72-203ENST00000378725 LOC730098B7Z3J9 87 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 NRG2O14511 850 aaPredicted RBP19.83■□□□□ 0.77
SSU72-203ENST00000378725 CYP26A1O43174 497 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 CALCAP01258 141 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 F11P03951 625 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 MYL4P12829 197 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 BRD2P25440 801 aaKnown RBP19.83■□□□□ 0.77
SSU72-203ENST00000378725 PBX1P40424 430 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 USP8P40818 1118 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 JAM2P57087 298 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 ZP2Q05996 745 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 GAREM2Q75VX8 874 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 OTOP3Q7RTS5 596 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 TMEM150AQ86TG1 271 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 GAS2L3Q86XJ1 694 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 STKLD1Q8NE28 680 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 ZNF606Q8WXB4 792 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 IFNKQ9P0W0 207 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 UXTQ9UBK9 157 aaPredicted RBP19.83■□□□□ 0.77
SSU72-203ENST00000378725 NR2E1Q9Y466 385 aa19.83■□□□□ 0.77
SSU72-203ENST00000378725 ZFP37Q9Y6Q3 630 aaPredicted RBP19.83■□□□□ 0.77
SSU72-203ENST00000378725 C2orf16Q68DN1 1984 aa19.83■□□□□ 0.76
SSU72-203ENST00000378725 PTPRDP23468 1912 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 F8VZ95 297 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 PNMA6AP0CW24 399 aaPredicted RBP19.82■□□□□ 0.76
SSU72-203ENST00000378725 BPIFB4P59827 614 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 USP46P62068 366 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 PTK2Q05397 1052 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 MEA1Q16626 185 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 PTPN21Q16825 1174 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 GOLGA7BQ2TAP0 167 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 POTEHQ6S545 545 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 SHKBP1Q8TBC3 707 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 FGF13Q92913 245 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 RPGRIP1Q96KN7 1286 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 MYADMQ96S97 322 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 RBSNQ9H1K0 784 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 ACP6Q9NPH0 428 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 EPS15L1Q9UBC2 864 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 HESX1Q9UBX0 185 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 CDH7Q9ULB5 785 aa19.82■□□□□ 0.76
SSU72-203ENST00000378725 MAGED2Q9UNF1 606 aaPredicted RBP19.82■□□□□ 0.76
SSU72-203ENST00000378725 FAM92AA1XBS5 289 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 C2CD4DB7Z1M9 353 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 MED7O43513 233 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 RTN3O95197 1032 aaPredicted RBP19.81■□□□□ 0.76
SSU72-203ENST00000378725 GABRR2P28476 465 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 CDC25CP30307 473 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 GNA15P30679 374 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 SLC5A3P53794 718 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 BCAT1P54687 386 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 BST2Q10589 180 aaKnown RBP19.81■□□□□ 0.76
SSU72-203ENST00000378725 GET4Q7L5D6 327 aaPredicted RBP19.81■□□□□ 0.76
SSU72-203ENST00000378725 ZDHHC14Q8IZN3 488 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 PLCD3Q8N3E9 789 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 UBA3Q8TBC4 463 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 ACSF2Q96CM8 615 aaPredicted RBP19.81■□□□□ 0.76
SSU72-203ENST00000378725 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 GDE1Q9NZC3 331 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 NOTCH4Q99466 2003 aa19.81■□□□□ 0.76
SSU72-203ENST00000378725 A0A1W2PRU2 124 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 XPO1O14980 1071 aaKnown RBP19.8■□□□□ 0.76
SSU72-203ENST00000378725 SETSIPP0DME0 302 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 LAMP2P13473 410 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 GJA1P17302 382 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 CEBPBP17676 345 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 YWHAQP27348 245 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 SOX5P35711 763 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 SLC8A3P57103 927 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 PDE4CQ08493 712 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 FIGNQ5HY92 759 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 SLC47A2Q86VL8 602 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 NPAS3Q8IXF0 933 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 SCAMP5Q8TAC9 235 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 SLC35F5Q8WV83 523 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 EDEM3Q9BZQ6 932 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 XPO4Q9C0E2 1151 aaKnown RBP19.8■□□□□ 0.76
SSU72-203ENST00000378725 ATXN3LQ9H3M9 355 aa19.8■□□□□ 0.76
SSU72-203ENST00000378725 DENND4AQ7Z401 1863 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 SOBPA7XYQ1 873 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 THAP12O43422 761 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 TADA3O75528 432 aa19.79■□□□□ 0.76
SSU72-203ENST00000378725 GBP2P32456 591 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms