RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 RAPGEF1Q13905 1077 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 ARHGAP15Q53QZ3 475 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 CLEC20AQ6ZU45 233 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 NUP93Q8N1F7 819 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 STKLD1Q8NE28 680 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 TCEAL4Q96EI5 215 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 NECAB3Q96P71 396 aaPredicted RBP21.2■□□□□ 0.98
RER1-204ENST00000378518 MYADMQ96S97 322 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 KCNK16Q96T55 309 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 GPR88Q9GZN0 384 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 ATXN3LQ9H3M9 355 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 CSNK1G1Q9HCP0 422 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 EPS15L1Q9UBC2 864 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 NUP210Q8TEM1 1887 aaPredicted RBP21.2■□□□□ 0.98
RER1-204ENST00000378518 C5orf42Q9H799 3197 aa21.2■□□□□ 0.98
RER1-204ENST00000378518 UCHL3P15374 230 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 CCR2P41597 374 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 ZNF132P52740 706 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 SYCP1Q15431 976 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 GOLGA7BQ2TAP0 167 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 NPAS3Q8IXF0 933 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 NEK11Q8NG66 645 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 SHKBP1Q8TBC3 707 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 SHC3Q92529 594 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 MYRFLQ96LU7 910 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 ERGIC2Q96RQ1 377 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 SMOQ99835 787 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 DUSP16Q9BY84 665 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 SLITRK6Q9H5Y7 841 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 TMEM30AQ9NV96 361 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 COMMD8Q9NX08 183 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 GDE1Q9NZC3 331 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 TSPAN16Q9UKR8 245 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 FHOD1Q9Y613 1164 aa21.19■□□□□ 0.98
RER1-204ENST00000378518 RNF225M0QZC1 329 aaPredicted RBP21.18■□□□□ 0.98
RER1-204ENST00000378518 MED7O43513 233 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 LAMP2P13473 410 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 GJA1P17302 382 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 BCAT1P54687 386 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 IFRD2Q12894 506 aaPredicted RBP21.18■□□□□ 0.98
RER1-204ENST00000378518 TEAD2Q15562 447 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 ANKRD52Q8NB46 1076 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 ZMIZ2Q8NF64 920 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 MCRS1Q96EZ8 462 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 SLITRK1Q96PX8 696 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 IL21Q9HBE4 155 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 PNPLA8Q9NP80 782 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 RTN4Q9NQC3 1192 aaKnown RBP21.18■□□□□ 0.98
RER1-204ENST00000378518 FAM207AQ9NSI2 230 aaPredicted RBP21.18■□□□□ 0.98
RER1-204ENST00000378518 ZMYM5Q9UJ78 669 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 SIK3Q9Y2K2 1263 aa21.18■□□□□ 0.98
RER1-204ENST00000378518 ANAPC1Q9H1A4 1944 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 MOSPD3O75425 235 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 BEST1O76090 585 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 BRD2P25440 801 aaKnown RBP21.17■□□□□ 0.98
RER1-204ENST00000378518 GNA15P30679 374 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 SLC5A3P53794 718 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 DPY19L2P1Q6NXN4 242 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 GAREM2Q75VX8 874 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 MTSS1LQ765P7 747 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 MRPS31Q92665 395 aaKnown RBP21.17■□□□□ 0.98
RER1-204ENST00000378518 TTLL2Q9BWV7 592 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 GANQ9H2C0 597 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 FBXO44Q9H4M3 255 aa21.17■□□□□ 0.98
RER1-204ENST00000378518 AJAP1Q9UKB5 411 aaPredicted RBP21.17■□□□□ 0.98
RER1-204ENST00000378518 A0A1B0GTH6 734 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 O00370 1275 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 F11P03951 625 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 DDX6P26196 483 aaKnown RBP eCLIP21.16■□□□□ 0.983e-6■□□□□ 8.8
RER1-204ENST00000378518 YWHAQP27348 245 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 PPP3CCP48454 512 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 KLK7P49862 253 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 CYP4F8P98187 520 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 FANCCQ00597 558 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 PTK2Q05397 1052 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 BST2Q10589 180 aaKnown RBP21.16■□□□□ 0.98
RER1-204ENST00000378518 DRAP1Q14919 205 aaPredicted RBP21.16■□□□□ 0.98
RER1-204ENST00000378518 CNGA2Q16280 664 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 LCLAT1Q6UWP7 414 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 PDZD8Q8NEN9 1154 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 STK33Q9BYT3 514 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 TRPM5Q9NZQ8 1165 aa21.16■□□□□ 0.98
RER1-204ENST00000378518 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.16■□□□□ 0.98
RER1-204ENST00000378518 M0QYV0 167 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 TNFRSF10BO14763 440 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 THAP12O43422 761 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 SETSIPP0DME0 302 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 BPIFB4P59827 614 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 POLR2FP61218 127 aaKnown RBP21.15■□□□□ 0.98
RER1-204ENST00000378518 USP46P62068 366 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 GPR158Q5T848 1215 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 TTC30AQ86WT1 665 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 RNF135Q8IUD6 432 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 OVCA2Q8WZ82 227 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 TFAP2BQ92481 460 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 FBXO32Q969P5 355 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 NXPE3Q969Y0 559 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 SPAG5Q96R06 1193 aa21.15■□□□□ 0.98
RER1-204ENST00000378518 NAA15Q9BXJ9 866 aaKnown RBP21.15■□□□□ 0.98
RER1-204ENST00000378518 UBXN6Q9BZV1 441 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms