RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 AKAP12Q02952 1782 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 SPAG6O75602 509 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 STIP1P31948 543 aaKnown RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CRY2Q49AN0 593 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 NDFIP2Q9NV92 336 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 DDIT4Q9NX09 232 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 PCDHAC2Q9Y5I4 1007 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 DISP2A7MBM2 1401 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CACNA1FO60840 1977 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 MTSS1O43312 755 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 EPHB2P29323 1055 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 HIC1Q14526 733 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 MAPRE2Q15555 327 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 TTC23LQ6PF05 361 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 LONP2Q86WA8 852 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 STKLD1Q8NE28 680 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CPB2Q96IY4 423 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CD248Q9HCU0 757 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 SETD4Q9NVD3 440 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 ABI2Q9NYB9 513 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF711Q9Y462 761 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 AP1G2O75843 785 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 KCTD19Q17RG1 926 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CYB5D1Q6P9G0 228 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 DTX3LQ8TDB6 740 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 KAT5Q92993 513 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 OSMRQ99650 979 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 FAM129AQ9BZQ8 928 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 GANQ9H2C0 597 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 WHRNQ9P202 907 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CCDC78A2IDD5 438 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 ENO1P06733 434 aaKnown RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CTCFP49711 727 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-201ENST00000378156 DNAL1Q4LDG9 190 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 IL31Q6EBC2 164 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 C1orf186Q6ZWK4 172 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 TRIM54Q9BYV2 358 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 ABHD16BQ9H3Z7 469 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 CYP3A43Q9HB55 503 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 IRAK4Q9NWZ3 460 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 TAS2R14Q9NYV8 317 aa15.62■□□□□ 0.09
NPHP4-201ENST00000378156 M0QYT0 321 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CES2O00748 559 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PROSCO94903 275 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 RPL21P46778 160 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 SERPINB9P50453 376 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ALDH18A1P54886 795 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 TTMPQ5BVD1 217 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 REPS2Q8NFH8 660 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PCDHB7Q9Y5E2 793 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 MAP3K6O95382 1288 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CXCL8P10145 99 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ATICP31939 592 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CLEC16AQ2KHT3 1053 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 C4orf22Q6V702 233 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PPIL6Q8IXY8 311 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 RIBC1Q8N443 379 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PCSK9Q8NBP7 692 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ALDH1A1P00352 501 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 YY1P25490 414 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 EFTUD2Q15029 972 aaKnown RBP eCLIP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CHSY1Q86X52 802 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PCMTD2Q9NV79 361 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 CYB561D2O14569 222 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 RPLP2P05387 115 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 PRKCIP41743 596 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 SERPINB10P48595 397 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 IMPG1Q17R60 797 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 FAXCQ5TGI0 409 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ZNF662Q6ZS27 426 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ACP6Q9NPH0 428 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 OLA1Q9NTK5 396 aaKnown RBP15.61■□□□□ 0.09
NPHP4-201ENST00000378156 FZD1Q9UP38 647 aa15.61■□□□□ 0.09
NPHP4-201ENST00000378156 ASTN1O14525 1302 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 DNAJC6O75061 913 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 RARAP10276 462 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 SCTRP47872 440 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 DLG4P78352 724 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 PTPN11Q06124 597 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-201ENST00000378156 AADACL2Q6P093 401 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 VSIG10LQ86VR7 867 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 C3orf20Q8ND61 904 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 THAP11Q96EK4 314 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 VTA1Q9NP79 307 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 BTNL9Q6UXG8 535 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 OR9Q1Q8NGQ5 310 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 PTPRN2Q92932 1015 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 FRMD8Q9BZ67 464 aaPredicted RBP15.6■□□□□ 0.09
NPHP4-201ENST00000378156 ADCY3O60266 1144 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 THP07101 528 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 ALDH7A1P49419 539 aaKnown RBP15.6■□□□□ 0.09
NPHP4-201ENST00000378156 C10orf120Q5SQS8 335 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 ZPBP2Q6X784 338 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 FGFBP2Q9BYJ0 223 aa15.6■□□□□ 0.09
NPHP4-201ENST00000378156 ADA2Q9NZK5 511 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms