RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CDR2LQ86X02 465 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FBXO36Q8NEA4 188 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PRPF18Q99633 342 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FOXP3Q9BZS1 431 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 CDV3Q9UKY7 258 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 ZNF189O75820 626 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 NDUFB10O96000 172 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 RRM2BQ7LG56 351 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 TMEM161AQ9NX61 479 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 BLOC1S6Q9UL45 172 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PRR12Q9ULL5 1215 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 L1RE1Q9UN81 338 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 CDY2AQ9Y6F7 541 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 CDY1Q9Y6F8 540 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 A0A087X0T9 212 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 WBP4O75554 376 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FKBP9O95302 570 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 ARIH2O95376 493 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 AMHP03971 560 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FAM228BP0C875 321 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 KCNK10P57789 538 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 MFN1Q8IWA4 741 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PCDHB2Q9Y5E7 798 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PSTPIP1O43586 416 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 CAPZA2P47755 286 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 ORC1Q13415 861 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 SEMA6BQ9H3T3 888 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 PNMA8BQ9ULN7 279 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FNTAP49354 379 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 TGFB2P61812 414 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 ZNF677Q86XU0 584 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 DDHD1Q8NEL9 900 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 TRIM62Q9BVG3 475 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 TMEM120AQ9BXJ8 343 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 STN1Q9H668 368 aaKnown RBP12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 NSMCE4AQ9NXX6 385 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 FAM50BQ9Y247 325 aa12.43□□□□□ -0.42
PCDHA9-201ENST00000378122 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 NDUFS3O75489 264 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 SGO1Q5FBB7 561 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CHMP1BQ7LBR1 199 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 FAM153AQ9UHL3 310 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 UBOX5O94941 541 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 KRT16P08779 473 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 TOB1P50616 345 aaPredicted RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CCL23P55773 120 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 TRIM16LQ309B1 348 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 XKR3Q5GH77 459 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CCDC103Q8IW40 242 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 EFHBQ8N7U6 833 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 TFB1MQ8WVM0 346 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 MXRA8Q9BRK3 442 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 KLHL4Q9C0H6 718 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 USP1O94782 785 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 GJC2Q5T442 439 aaPredicted RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 MTDHQ86UE4 582 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CCDC60Q8IWA6 550 aaPredicted RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 LRRC71Q8N4P6 559 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 ZNF556Q9HAH1 456 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 NEXMIFQ5QGS0 1516 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 C5orf58C9J3I9 102 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CASP4P49662 377 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 PKN3Q6P5Z2 889 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 PABPC5Q96DU9 382 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 FUCA2Q9BTY2 467 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 SCN3BQ9NY72 215 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 WHRNQ9P202 907 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 PKP3Q9Y446 797 aa12.42□□□□□ -0.42
PCDHA9-201ENST00000378122 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 DEFA1P59665 94 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 DEFA3P59666 94 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 ATF7IP2Q5U623 682 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 OOSP2Q86WS3 158 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 KRT35Q92764 455 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 MOV10L1Q9BXT6 1211 aaKnown RBP12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 C19orf81C9J6K1 198 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 RFX5P48382 616 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 ARHGEF7Q14155 803 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 UGP2Q16851 508 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 TJAP1Q5JTD0 557 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 CAVIN3Q969G5 261 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 NAGPAQ9UK23 515 aa12.41□□□□□ -0.42
PCDHA9-201ENST00000378122 ZMYND8Q9ULU4 1186 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms