RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 MAGEA11P43364 429 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 ZXDBP98169 803 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 PLA2G2CQ5R387 149 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 CC2D1AQ6P1N0 951 aaPredicted RBP20.49■□□□□ 0.87
CBWD3-204ENST00000377349 CACNA2D4Q7Z3S7 1137 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 CCDC127Q96BQ5 260 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 SPATA32Q96LK8 384 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 CRTAC1Q9NQ79 661 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 AGPAT3Q9NRZ7 376 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 SLC8A2Q9UPR5 921 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 NME7Q9Y5B8 376 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 ASCC3Q8N3C0 2202 aaKnown RBP20.49■□□□□ 0.87
CBWD3-204ENST00000377349 PLXND1Q9Y4D7 1925 aa20.49■□□□□ 0.87
CBWD3-204ENST00000377349 TNRC6BQ9UPQ9 1833 aaKnown RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 TRAV19A0A0A6YYK7 116 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 A0A1B0GVL5 298 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 TM4SF5O14894 197 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 KIAA0391O15091 583 aaKnown RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 FOXD2O60548 495 aaPredicted RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 ZNF806P0C7X5 589 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 TCF3P15923 654 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 PCSK1P29120 753 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 LIMK1P53667 647 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 PSMC1P62191 440 aaKnown RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 MYO1EQ12965 1108 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 DPH6Q7L8W6 267 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 HS2ST1Q7LGA3 356 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 SPATA2LQ8IUW3 424 aaPredicted RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 SCN4BQ8IWT1 228 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 CPA6Q8N4T0 437 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 ARL14EPQ8N8R7 260 aaPredicted RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 ZC3H10Q96K80 434 aaKnown RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 HHIPQ96QV1 700 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 SYT15Q9BQS2 421 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 DUS2Q9NX74 493 aaKnown RBP20.48■□□□□ 0.87
CBWD3-204ENST00000377349 CHD6Q8TD26 2715 aa20.48■□□□□ 0.87
CBWD3-204ENST00000377349 CEP192Q8TEP8 1941 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 AKAP3O75969 853 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 CKMP06732 381 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 USP17L7P0C7H9 530 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 TNNI1P19237 187 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 KRT85P78386 507 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 AMPD2Q01433 879 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 SNRNP35Q16560 246 aaKnown RBP20.47■□□□□ 0.87
CBWD3-204ENST00000377349 GAB4Q2WGN9 574 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 EPM2AIP1Q7L775 607 aaPredicted RBP20.47■□□□□ 0.87
CBWD3-204ENST00000377349 CAMKK1Q8N5S9 505 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 RPLP0P6Q8NHW5 317 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 ZNF507Q8TCN5 953 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 SCFD1Q8WVM8 642 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 MYLPFQ96A32 169 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 HPDLQ96IR7 371 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 FNBP1Q96RU3 617 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 LINC00597Q9H2U6 94 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 EXOC1Q9NV70 894 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 RCOR1Q9UKL0 485 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 UBE4BO95155 1302 aa20.47■□□□□ 0.87
CBWD3-204ENST00000377349 KRT37O76014 449 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 CCDC192P0DO97 292 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 PFKFB1P16118 471 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 USP46P62068 366 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 SURF1Q15526 300 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 DUOXA2Q1HG44 320 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 PLK5Q496M5 336 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 FBXO43Q4G163 708 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 SYT13Q7L8C5 426 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 SH3RF2Q8TEC5 729 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 ATP2A3Q93084 1043 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 SPATA17Q96L03 361 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 MMS19Q96T76 1030 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 SMOC1Q9H4F8 434 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 KIAA1586Q9HCI6 787 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 CDH9Q9ULB4 789 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 ARHGAP26Q9UNA1 814 aa20.46■□□□□ 0.87
CBWD3-204ENST00000377349 ANTXRLA6NF34 631 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 TGFB1I1O43294 461 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 WARSP23381 471 aaKnown RBP20.45■□□□□ 0.86
CBWD3-204ENST00000377349 BDNFP23560 247 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 IFNAR2P48551 515 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 AASDHQ4L235 1098 aaPredicted RBP20.45■□□□□ 0.86
CBWD3-204ENST00000377349 CNNM4Q6P4Q7 775 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 VSTM1Q6UX27 236 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 XXYLT1Q8NBI6 393 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 TTC16Q8NEE8 873 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 CD101Q93033 1021 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 DUSP15Q9H1R2 295 aaPredicted RBP20.45■□□□□ 0.86
CBWD3-204ENST00000377349 ASPMQ8IZT6 3477 aa20.45■□□□□ 0.86
CBWD3-204ENST00000377349 EXOC3O60645 756 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 SLFN14P0C7P3 912 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 DMC1Q14565 340 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 C4orf50Q6ZRC1 276 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 WDR49Q8IV35 697 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 PAGE5Q96GU1 130 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 PCED1BQ96HM7 432 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 TTLL2Q9BWV7 592 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 TMEM30AQ9NV96 361 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 MAGEC2Q9UBF1 373 aaPredicted RBP20.44■□□□□ 0.86
CBWD3-204ENST00000377349 EBF1Q9UH73 591 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 PCDHGA5Q9Y5G8 931 aa20.44■□□□□ 0.86
CBWD3-204ENST00000377349 PCNX2A6NKB5 2137 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms