RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 KDM4CQ9H3R0 1056 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 CTCFP49711 727 aaPredicted RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 POLD3Q15054 466 aaPredicted RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 TTC39BQ5VTQ0 682 aaPredicted RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 NOA1Q8NC60 698 aaKnown RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 TMEM134Q9H6X4 195 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 ALG13Q9NP73 1137 aaKnown RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 E2F6O75461 281 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SYF2O95926 243 aaKnown RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 TAF11Q15544 211 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SPATA21Q7Z572 469 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC20A1Q8WUM9 679 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 PCMTD2Q9NV79 361 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 ADA2Q9NZK5 511 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 USP18Q9UMW8 372 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 RFC1P35251 1148 aaPredicted RBP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 HASPINQ8TF76 798 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 PACSIN1Q9BY11 444 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 MRPL9Q9BYD2 267 aaKnown RBP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 RRN3Q9NYV6 651 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 AP4E1Q9UPM8 1137 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 TCP11X1B4DZS4 312 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 STX7O15400 261 aaKnown RBP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 MSCO60682 206 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 TKTL1P51854 596 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 GUCY1A3Q02108 690 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 TATDN1Q6P1N9 297 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 ZNF467Q7Z7K2 595 aaPredicted RBP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 DDX42Q86XP3 938 aaKnown RBP eCLIP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 C4orf33Q8N1A6 199 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 RXFP2Q8WXD0 754 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 CDK5RAP1Q96SZ6 601 aaKnown RBP18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 ASPSCR1Q9BZE9 553 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 GRID1Q9ULK0 1009 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 NFASCO94856 1347 aa18.58■□□□□ 0.57
CLSTN1-202ENST00000377298 SLIT3O75094 1523 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 TMEM150BA6NC51 233 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 DEFB128Q7Z7B8 93 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 UCMAQ8WVF2 138 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 PMPCBO75439 489 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 POMCP01189 267 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 RAG1P15918 1043 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 KRT4P19013 534 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 AARSP49588 968 aaKnown RBP eCLIP18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 KCNT1Q5JUK3 1230 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 C1orf186Q6ZWK4 172 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 ZDHHC17Q8IUH5 632 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 ZNF606Q8WXB4 792 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 SPATA17Q96L03 361 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 CAPN6Q9Y6Q1 641 aa18.58■□□□□ 0.56
CLSTN1-202ENST00000377298 MYL2P10916 166 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ABCE1P61221 599 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 MTFR1Q15390 333 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PTGISQ16647 500 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 CCDC60Q8IWA6 550 aaPredicted RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 AGR3Q8TD06 166 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 VCPIP1Q96JH7 1222 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PCDHB5Q9Y5E4 795 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PCDHAC2Q9Y5I4 1007 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 NRCAMQ92823 1304 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 A0A087X0B3 334 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PLA2G6O60733 806 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PQBP1O60828 265 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 NDST1P52848 882 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 COBLL1Q53SF7 1204 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 SLC26A7Q8TE54 656 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PRMT1Q99873 361 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 DUSP9Q99956 384 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ADAM33Q9BZ11 813 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ETNK1Q9HBU6 452 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 MRGBPQ9NV56 204 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ARL2BPQ9Y2Y0 163 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ASS1P00966 412 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 CHN1P15882 459 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 EEF1B2P24534 225 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 AKAP5P24588 427 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 EFEMP1Q12805 493 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 SPATS2LQ9NUQ6 558 aaKnown RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 TRIM17Q9Y577 477 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 MED1Q15648 1581 aaPredicted RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 SLC12A8A0AV02 714 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 TBKBP1A7MCY6 615 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 PAEPP09466 180 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ITIH5Q86UX2 942 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 FAM131BQ86XD5 332 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ACTRT1Q8TDG2 376 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 FBXO44Q9H4M3 255 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ATRNO75882 1429 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ZNF268Q14587 947 aaPredicted RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 ZRANB3Q5FWF4 1079 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 MEI1Q5TIA1 1274 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 TMC7Q7Z402 723 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 RMDN2Q96LZ7 410 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 NAT9Q9BTE0 207 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 TSPAN16Q9UKR8 245 aa18.57■□□□□ 0.56
CLSTN1-202ENST00000377298 LACTBL1A8MY62 500 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 PRPF4O43172 522 aaKnown RBP eCLIP18.56■□□□□ 0.565e-6■■■□□ 18.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms