RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 STRIP2Q9ULQ0 834 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 ADAMTS5Q9UNA0 930 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 KBTBD13C9JR72 458 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TOM1L1O75674 476 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 HAUS5O94927 633 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 ERBB2P04626 1255 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 HOXC6P09630 235 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 RBP3P10745 1247 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 BGNP21810 368 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 NEK3P51956 506 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 AP3M2P53677 418 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 CDH8P55286 799 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 OSTNP61366 133 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 MMRN1Q13201 1228 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TNFAIP1Q13829 316 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 DPYSL3Q14195 570 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
ACTN1-202ENST00000376839 HADHQ16836 314 aaKnown RBP13.83□□□□□ -0.2
ACTN1-202ENST00000376839 KBTBD12Q3ZCT8 623 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 C4orf50Q6ZRC1 276 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 KCTD6Q8NC69 237 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TTC17Q96AE7 1141 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 OSBPL1AQ9BXW6 950 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 TRIM55Q9BYV6 548 aa13.83□□□□□ -0.2
ACTN1-202ENST00000376839 E7ENQ6 273 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 AVILO75366 819 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 LUC7L3O95232 432 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 DHRS4L1P0CG22 281 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SRGAP2CP0DJJ0 459 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 DPEP1P16444 411 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 KCNA3P22001 575 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 MIPP30301 263 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 OAZ1P54368 228 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PRAMEF18Q5VWM3 479 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 TTC7BQ86TV6 843 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.25e-8■■■■■ 204.6
ACTN1-202ENST00000376839 THNSL1Q8IYQ7 743 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CEP120Q8N960 986 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ALKBH8Q96BT7 664 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ZNF668Q96K58 619 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ACO2Q99798 780 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CALN1Q9BXU9 219 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 MRPL4Q9BYD3 311 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 IGKV6D-21A0A0A0MT36 114 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 APOC4-APOC2K7ER74 178 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ABLIM1O14639 778 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 OGTO15294 1046 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 FAM155BO75949 473 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 APOC2P02655 101 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PYGBP11216 843 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PTPRAP18433 802 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 UBA1P22314 1058 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ARFIP2P53365 341 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SESN3P58005 492 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 YWHAEP62258 255 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 STXBP2Q15833 593 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 RAB6CQ53S08 254 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SH2D5Q6ZV89 423 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 APBB1IPQ7Z5R6 666 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ZC3H18Q86VM9 953 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 XYLT1Q86Y38 959 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SKA1Q96BD8 255 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 ANKRD27Q96NW4 1050 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CYTH2Q99418 400 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 FRMD8P1Q9BZ68 369 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 RAB6CQ9H0N0 254 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CPSF3Q9UKF6 684 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 E5RJQ4 531 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 LIN7AO14910 233 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 POLR2BP30876 1174 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 GRM1Q13255 1194 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PRKD1Q15139 912 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 SLC44A1Q8WWI5 657 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 APOPT1Q96IL0 206 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 PEBP4Q96S96 227 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 BTBD10Q9BSF8 475 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 HMGXB4Q9UGU5 601 aa13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CORO1CQ9ULV4 474 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-202ENST00000376839 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 MCF2LO15068 1137 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CCDC22O60826 627 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 DLDP09622 509 aaKnown RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 ATP6V1C1P21283 382 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 PCK1P35558 622 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 RFC5P40937 340 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 YWHAGP61981 247 aaKnown RBP eCLIP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 SH3PXD2AQ5TCZ1 1133 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CDHR3Q6ZTQ4 885 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
ACTN1-202ENST00000376839 CMASQ8NFW8 434 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-202ENST00000376839 FNIP1Q8TF40 1166 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms