RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ATP2A3Q93084 1043 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 SYAP1Q96A49 352 aaPredicted RBP22.44■■□□□ 1.18
VSX1-201ENST00000376707 PAGE5Q96GU1 130 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 P2RY13Q9BPV8 354 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 GZF1Q9H116 711 aaPredicted RBP22.44■■□□□ 1.18
VSX1-201ENST00000376707 ECT2Q9H8V3 914 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 USP25Q9UHP3 1055 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 HPSEQ9Y251 543 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 WNT6Q9Y6F9 365 aa22.44■■□□□ 1.18
VSX1-201ENST00000376707 DENND4CQ5VZ89 1909 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 OBSL1O75147 1896 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 A8MXQ7 604 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 PRR5-ARHGAP8B1AHC4 643 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 F8VP50 259 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 RETP07949 1114 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 PTPN1P18031 435 aaKnown RBP22.43■■□□□ 1.18
VSX1-201ENST00000376707 DRD1P21728 446 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 SDHBP21912 280 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 GJA4P35212 333 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 CASP4P49662 377 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 USP46P62068 366 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 ARHGAP8P85298 464 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 BIRC3Q13489 604 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 PKN3Q6P5Z2 889 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 CEP68Q76N32 757 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.43■■□□□ 1.18
VSX1-201ENST00000376707 SPATA32Q96LK8 384 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 C8orf48Q96LL4 319 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 ELOVL4Q9GZR5 314 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 ARHGAP26Q9UNA1 814 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 SLC8A2Q9UPR5 921 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 NME7Q9Y5B8 376 aa22.43■■□□□ 1.18
VSX1-201ENST00000376707 FAM237AA0A1B0GTK4 181 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 KLRC4O43908 158 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 EGFP01133 1207 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 PFKFB1P16118 471 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 GALK1P51570 392 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 SPEM2Q0P670 501 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 NR1H3Q13133 447 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 WDR5BQ86VZ2 330 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 TTLL2Q9BWV7 592 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 XYLT2Q9H1B5 865 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 DPEP3Q9H4B8 488 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 FBRSL1Q9HCM7 1045 aaKnown RBP22.42■■□□□ 1.18
VSX1-201ENST00000376707 PARD6AQ9NPB6 346 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 DMXL1Q9Y485 3027 aa22.42■■□□□ 1.18
VSX1-201ENST00000376707 A0A1B0GVL5 298 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 RNF40O75150 1001 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 MYL1P05976 194 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 PFKLP17858 780 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 TGM1P22735 817 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 HOXC13P31276 330 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 PPP3CCP48454 512 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 AP3M2P53677 418 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 NOP14P78316 857 aaKnown RBP22.41■■□□□ 1.18
VSX1-201ENST00000376707 STK4Q13043 487 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 PSMD2Q13200 908 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 ZNF699Q32M78 642 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 EML3Q32P44 896 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 B3GALNT2Q8NCR0 500 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 KIAA0895Q8NCT3 520 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 PLEKHO2Q8TD55 490 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 CHAMP1Q96JM3 812 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 ZNF518BQ9C0D4 1074 aa22.41■■□□□ 1.18
VSX1-201ENST00000376707 CDV3Q9UKY7 258 aaKnown RBP22.41■■□□□ 1.18
VSX1-201ENST00000376707 LRRIQ3A6PVS8 624 aaPredicted RBP22.4■■□□□ 1.18
VSX1-201ENST00000376707 ABL1P00519 1130 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 TCF3P15923 654 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 KMT5BQ4FZB7 885 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 FBXO43Q4G163 708 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
VSX1-201ENST00000376707 NAIF1Q69YI7 327 aaPredicted RBP22.4■■□□□ 1.18
VSX1-201ENST00000376707 PARD3BQ8TEW8 1205 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 TMEM174Q8WUU8 243 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 CD101Q93033 1021 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 ATP6V1DQ9Y5K8 247 aa22.4■■□□□ 1.18
VSX1-201ENST00000376707 ZNF638Q14966 1978 aaKnown RBP22.39■■□□□ 1.18
VSX1-201ENST00000376707 ZNF840PA6NDX5 716 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 CLDN5O00501 218 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 LRP3O75074 770 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 NFATC1O95644 943 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 PXNP49023 591 aaPredicted RBP22.39■■□□□ 1.17
VSX1-201ENST00000376707 CACNA2D1P54289 1103 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 IFRD2Q12894 506 aaPredicted RBP22.39■■□□□ 1.17
VSX1-201ENST00000376707 NCOA4Q13772 614 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 ZNF667Q5HYK9 610 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 SLC9A9Q8IVB4 645 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 SLITRK1Q96PX8 696 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 B3GNT5Q9BYG0 378 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 SCAND2PQ9GZW5 306 aaPredicted RBP22.39■■□□□ 1.17
VSX1-201ENST00000376707 LINC00597Q9H2U6 94 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 SMYD3Q9H7B4 428 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 VRTNQ9H8Y1 702 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 DMAC2Q9NW81 257 aa22.39■■□□□ 1.17
VSX1-201ENST00000376707 ATP8B3O60423 1300 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 MED19A0JLT2 244 aaPredicted RBP22.38■■□□□ 1.17
VSX1-201ENST00000376707 LEFTY2O00292 366 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 CDH8P55286 799 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 CLDN10P78369 228 aa22.38■■□□□ 1.17
VSX1-201ENST00000376707 TAF10Q12962 218 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms