RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FAM160A2Q8N612 972 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-204ENST00000376643 ARL14EPQ8N8R7 260 aaPredicted RBP15.73■□□□□ 0.11
HDAC6-204ENST00000376643 STKLD1Q8NE28 680 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 SH3RF2Q8TEC5 729 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 OVCA2Q8WZ82 227 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 CCDC127Q96BQ5 260 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 PCED1BQ96HM7 432 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 TNIP3Q96KP6 325 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 CRTAC1Q9NQ79 661 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
HDAC6-204ENST00000376643 TFIP11Q9UBB9 837 aaKnown RBP15.73■□□□□ 0.11
HDAC6-204ENST00000376643 PTPRJQ12913 1337 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-204ENST00000376643 A8MXQ7 604 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 AXIN1O15169 862 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 TGFB1I1O43294 461 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 RHOBTB1O94844 696 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 RTN3O95197 1032 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-204ENST00000376643 KIF20AO95235 890 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 EGFP01133 1207 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 MYL1P05976 194 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 PDGFRBP09619 1106 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 ZSCAN22P10073 491 aaPredicted RBP15.72■□□□□ 0.11
HDAC6-204ENST00000376643 LMO2P25791 158 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 GALK1P51570 392 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 LIMK1P53667 647 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 SLC7A9P82251 487 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 PSMD2Q13200 908 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 KNOP1Q1ED39 458 aaKnown RBP15.72■□□□□ 0.11
HDAC6-204ENST00000376643 EML3Q32P44 896 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 MDH1BQ5I0G3 518 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 IL31Q6EBC2 164 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 NELFCDQ8IXH7 590 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 RDH13Q8NBN7 331 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 TTC16Q8NEE8 873 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 SCFD1Q8WVM8 642 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 DNAI2Q9GZS0 605 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 VRTNQ9H8Y1 702 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 EBF1Q9UH73 591 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 USP25Q9UHP3 1055 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 WNT6Q9Y6F9 365 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.72■□□□□ 0.11
HDAC6-204ENST00000376643 DENND4CQ5VZ89 1909 aa15.72■□□□□ 0.11
HDAC6-204ENST00000376643 ZNF638Q14966 1978 aaKnown RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 OTOL1A6NHN0 477 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 ATP2C2O75185 946 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 EPN2O95208 641 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 F13A1P00488 732 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 PTPN1P18031 435 aaKnown RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 EIF2DP41214 584 aaKnown RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 EHHADHQ08426 723 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 BIRC3Q13489 604 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 HSF5Q4G112 596 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 AASDHQ4L235 1098 aaPredicted RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 B3GALNT2Q8NCR0 500 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 GLIS3Q8NEA6 775 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 HPS3Q969F9 1004 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 CCDC47Q96A33 483 aaKnown RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 ZC3H10Q96K80 434 aaKnown RBP15.71■□□□□ 0.11
HDAC6-204ENST00000376643 CYP2S1Q96SQ9 504 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 COMMD8Q9NX08 183 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 TBC1D14Q9P2M4 693 aa15.71■□□□□ 0.11
HDAC6-204ENST00000376643 DMXL1Q9Y485 3027 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 WDR87Q6ZQQ6 2873 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 C2orf78A6NCI8 922 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF840PA6NDX5 716 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-204ENST00000376643 F8VP50 259 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 LEFTY2O00292 366 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 CLIC2O15247 247 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 ADH1CP00326 375 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 HOXD13P35453 343 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 SRSF5Q13243 272 aaKnown RBP15.7■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF699Q32M78 642 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF667Q5HYK9 610 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 RESP18Q5W5W9 173 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 NUDT18Q6ZVK8 323 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 NUP93Q8N1F7 819 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 RPLP0P6Q8NHW5 317 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 TMEM174Q8WUU8 243 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 OTUB2Q96DC9 234 aa15.7■□□□□ 0.1
HDAC6-204ENST00000376643 NXF1Q9UBU9 619 aaKnown RBP15.7■□□□□ 0.1
HDAC6-204ENST00000376643 OBSL1O75147 1896 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 HCRTO43612 131 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 OLFM2O95897 454 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 ABL1P00519 1130 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 CST3P01034 146 aaPredicted RBP15.69■□□□□ 0.1
HDAC6-204ENST00000376643 RPN1P04843 607 aaKnown RBP15.69■□□□□ 0.1
HDAC6-204ENST00000376643 SLFN14P0C7P3 912 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF806P0C7X5 589 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 YWHAQP27348 245 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 RAP1GAPP47736 663 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 TUBP50607 506 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 DMC1Q14565 340 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 SLC9A9Q8IVB4 645 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 TSTD1Q8NFU3 115 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 RIN3Q8TB24 985 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 TAF4BQ92750 862 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms