RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 MROH7Q68CQ1 1323 aa12.96□□□□□ -0.34
DDR1-224ENST00000376567 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 RECQL4O94761 1208 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CETPP11597 493 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 AMPD1P23109 780 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 ELK3P41970 407 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CENPCQ03188 943 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 GLIS1Q8NBF1 620 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.342e-8■■□□□ 13.3
DDR1-224ENST00000376567 SLC2A14Q8TDB8 520 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 RNF139Q8WU17 664 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 FAM136AQ96C01 138 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CCDC124Q96CT7 223 aaKnown RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 MROH8Q9H579 483 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 MYPNQ86TC9 1320 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 MAPK13O15264 365 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CFLARO15519 480 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 HMGCRP04035 888 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 ATP4AP20648 1035 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 ATXN3P54252 364 aaPredicted RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 FAM117BQ6P1L5 589 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 DTX3LQ8TDB6 740 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 BHMTQ93088 406 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 ZFP69BQ9UJL9 534 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 SHANK3Q9BYB0 1731 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CLDN5O00501 218 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 HCRTO43612 131 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 ZNF280AP59817 542 aaPredicted RBP12.95□□□□□ -0.34
DDR1-224ENST00000376567 DEUP1Q05D60 604 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 EFTUD2Q15029 972 aaKnown RBP eCLIP12.95□□□□□ -0.344e-6■■■■□ 22.5
DDR1-224ENST00000376567 NOTUMQ6P988 496 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 NUDCD3Q8IVD9 361 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 TTC25Q96NG3 672 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 GPR88Q9GZN0 384 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 ABCF3Q9NUQ8 709 aa12.95□□□□□ -0.34
DDR1-224ENST00000376567 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PGK1P00558 417 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 RBL1P28749 1068 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 TYK2P29597 1187 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 HNRNPH1P31943 449 aaKnown RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 POU5F1BQ06416 359 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PCSK7Q16549 785 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 NDUFAF2Q8N183 169 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 CELF6Q96J87 481 aaKnown RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 RSAD1Q9HA92 442 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 DDIT4Q9NX09 232 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 WHRNQ9P202 907 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PSMC3IPQ9P2W1 217 aaPredicted RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 CIB2O75838 187 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 EPHB1P54762 984 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 TAP1Q03518 808 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 EFHC2Q5JST6 749 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 CCNYL1Q8N7R7 359 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 C1orf127Q8N9H9 656 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PDCD6IPQ8WUM4 868 aaKnown RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 LPPQ93052 612 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 FAM129AQ9BZQ8 928 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 ACTR5Q9H9F9 607 aaPredicted RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 GBA2Q9HCG7 927 aaPredicted RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 TNRC6CQ9HCJ0 1690 aaKnown RBP12.94□□□□□ -0.34
DDR1-224ENST00000376567 BTNL10A8MVZ5 291 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 IGF2BP3O00425 579 aaKnown RBP eCLIP12.94□□□□□ -0.343e-6■□□□□ 10.4
DDR1-224ENST00000376567 CXCL11O14625 94 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 NDC80O14777 642 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 VDRP11473 427 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 RASSF2P50749 326 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 MUM1Q2TAK8 710 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 CXCL17Q6UXB2 119 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 TAS1R3Q7RTX0 852 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 RASGEF1CQ8N431 466 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 SLITRK1Q96PX8 696 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 RBPJLQ9UBG7 517 aa12.94□□□□□ -0.34
DDR1-224ENST00000376567 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
DDR1-224ENST00000376567 DIAPH2O60879 1101 aa12.93□□□□□ -0.34
DDR1-224ENST00000376567 PPFIA2O75334 1257 aa12.93□□□□□ -0.34
DDR1-224ENST00000376567 UPP2O95045 317 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms