RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 ARNTLO00327 626 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 SLC16A3O15427 465 aaKnown RBP15.16■□□□□ 0.02
CLCN6-203ENST00000376490 STX10O60499 249 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 DDX6P26196 483 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLCN6-203ENST00000376490 MXI1P50539 228 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 CBWD6Q4V339 395 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 DCAF17Q5H9S7 520 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-203ENST00000376490 CBWD3Q5JTY5 395 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 CBWD5Q5RIA9 395 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 ZNF852Q6ZMS4 543 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 FUKQ8N0W3 1084 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 C12orf29Q8N999 325 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 FBXL13Q8NEE6 735 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 TTC8Q8TAM2 541 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 NELFBQ8WX92 580 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 TATDN2Q93075 761 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 CEP295NLQ96MC4 621 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 TWNKQ96RR1 684 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 LTB4R2Q9NPC1 389 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 FAM86C1Q9NVL1 165 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-203ENST00000376490 ZMYM5Q9UJ78 669 aa15.16■□□□□ 0.02
CLCN6-203ENST00000376490 C2orf78A6NCI8 922 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CCDC130P13994 396 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CD58P19256 250 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 PPP1R2P41236 205 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 STX17P56962 302 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 IFRD2Q12894 506 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-203ENST00000376490 FZD5Q13467 585 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 ARHGAP29Q52LW3 1261 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 TTI2Q6NXR4 508 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 FAM35AQ86V20 835 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 ARL14EPQ8N8R7 260 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 RIN3Q8TB24 985 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CSGALNACT1Q8TDX6 532 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 WHAMMQ8TF30 809 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 ATOH1Q92858 354 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-203ENST00000376490 NELL2Q99435 816 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 TTLL2Q9BWV7 592 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CYP3A43Q9HB55 503 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 FAM49BQ9NUQ9 324 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 GTSE1Q9NYZ3 720 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 GCNT4Q9P109 453 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 KIAA1468Q9P260 1216 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 CTNND2Q9UQB3 1225 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 PIAS3Q9Y6X2 628 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
CLCN6-203ENST00000376490 FANCMQ8IYD8 2048 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 AP1G2O75843 785 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 BEST1O76090 585 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 USP17L7P0C7H9 530 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 HDCP19113 662 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 TARSP26639 723 aaKnown RBP15.14■□□□□ 0.01
CLCN6-203ENST00000376490 SOX9P48436 509 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 TNK2Q07912 1038 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 INCA1Q0VD86 236 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 TAF10Q12962 218 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 FRMD5Q7Z6J6 570 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 NUP93Q8N1F7 819 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 SCAMP5Q8TAC9 235 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 FAM3CQ92520 227 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 SLC35C1Q96A29 364 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 CEP63Q96MT8 703 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 SMOQ99835 787 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 NT5C1AQ9BXI3 368 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 OSBPL6Q9BZF3 934 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 THG1LQ9NWX6 298 aaKnown RBP15.14■□□□□ 0.01
CLCN6-203ENST00000376490 EHD2Q9NZN4 543 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 TRPM5Q9NZQ8 1165 aa15.14■□□□□ 0.01
CLCN6-203ENST00000376490 CHORDC1Q9UHD1 332 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-203ENST00000376490 NDRG2Q9UN36 371 aaKnown RBP15.14■□□□□ 0.01
CLCN6-203ENST00000376490 TRAV19A0A0A6YYK7 116 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ZNF840PA6NDX5 716 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 MAN2B1O00754 1011 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 TNFRSF10BO14763 440 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 CILPO75339 1184 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ABL1P00519 1130 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 CKMP06732 381 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 YWHAQP27348 245 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ADORA2BP29275 332 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 KPNA1P52294 538 aaPredicted RBP15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ANGPT1Q15389 498 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 CCDC40Q4G0X9 1142 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ZNF394Q53GI3 561 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 WDR44Q5JSH3 913 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ALYREFQ86V81 257 aaKnown RBP15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ZNF687Q8N1G0 1237 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 TTC16Q8NEE8 873 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ZMIZ2Q8NF64 920 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 CYFIP2Q96F07 1278 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 SMARCD1Q96GM5 515 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 ARID3AQ99856 593 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 FAM83CQ9BQN1 747 aa15.13■□□□□ 0.01
CLCN6-203ENST00000376490 RNF38Q9H0F5 515 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms