RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ASNSD1Q9NWL6 643 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 USP18Q9UMW8 372 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FCHO1O14526 889 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SUPT20HL2P0C7V6 817 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KCNA4P22459 653 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SERPINB4P48594 390 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NCKAP1LP55160 1127 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MORF4L2Q15014 288 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SUPT20HL1Q3ZLR7 823 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 AP1ARQ63HQ0 302 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DSTYKQ6XUX3 929 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 VSIG10LQ86VR7 867 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SCUBE3Q8IX30 993 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RNF148Q8N7C7 305 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TTC13Q8NBP0 860 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FERMT1Q9BQL6 677 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PDE5AO76074 875 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 UNGP13051 313 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SIX1Q15475 284 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KATNAL2Q8IYT4 538 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 C12orf29Q8N999 325 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RXFP2Q8WXD0 754 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SEC14L1Q92503 715 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 USP6NLQ92738 828 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DENND2DQ9H6A0 471 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RNPEPL1Q9HAU8 725 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DDX56Q9NY93 547 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SENP1Q9P0U3 644 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SLC4A7Q9Y6M7 1214 aa15.01□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZNF541Q9H0D2 1346 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SRRM3A6NNA2 597 aaPredicted RBP15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 FSTL1Q12841 308 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZNF677Q86XU0 584 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 COPS5Q92905 334 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MTBPQ96DY7 904 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ASCC2Q9H1I8 757 aaPredicted RBP15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 AVENQ9NQS1 362 aaPredicted RBP15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 STRIP2Q9ULQ0 834 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 USP12O75317 370 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KRT38O76015 456 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TOP3BO95985 862 aaKnown RBP15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 OSBPP22059 807 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CALB2P22676 271 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GMPSP49915 693 aaPredicted RBP15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 OGDHQ02218 1023 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MSS51Q4VC12 460 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ATF7IP2Q5U623 682 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MON1BQ7L1V2 547 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CD101Q93033 1021 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 E2F7Q96AV8 911 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KIF12Q96FN5 646 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CGRRF1Q99675 332 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MED10Q9BTT4 135 aa15□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GOLGA8TH3BQL2 631 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 EDF1O60869 148 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 P4HA1P13674 534 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 RBL1P28749 1068 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TYK2P29597 1187 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GTF2A2P52657 109 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TFDP2Q14188 446 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PTPN20Q4JDL3 420 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 STK32AQ8WU08 396 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MFSD14AQ96MC6 490 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CCDC88AQ3V6T2 1871 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GOLGA8QA0A0J9YX86 632 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GOLGA8OA6NCC3 632 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 GOLGA8NF8WBI6 632 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 USP1O94782 785 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 VTNP04004 478 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MGAT5Q09328 741 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KHDC1Q4VXA5 237 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 EEF1DP3Q658K8 133 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 WDR75Q8IWA0 830 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ALLCQ8N6M5 410 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PGBD4Q96DM1 585 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZNF570Q96NI8 536 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 SRPK1Q96SB4 655 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TXLNGYQ9BZA5 131 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZFATQ9P243 1243 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CSADQ9Y600 493 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZWINTO95229 277 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 NPTXRO95502 500 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PTPN4P29074 926 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CCNHP51946 323 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 CUL3Q13618 768 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KCTD2Q14681 263 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 ZC3H12AQ5D1E8 599 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 EFCAB12Q6NXP0 572 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DENND5BQ6ZUT9 1274 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DEFB132Q7Z7B7 95 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 MCUQ8NE86 351 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 TEKT4Q8WW24 435 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 DDX1Q92499 740 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 PCDH9Q9HC56 1237 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 KCNG1Q9UIX4 513 aa14.99□□□□□ -0.01
TNFRSF1B-201ENST00000376259 hCG_1818297A0A087WSY0 165 aa14.98□□□□□ -0.01
TNFRSF1B-201ENST00000376259 VNN1O95497 513 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms