RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 MICAL3Q7RTP6 2002 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 FNDC1Q4ZHG4 1894 aaPredicted RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 PAPSS1O43252 624 aaPredicted RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 PHF2O75151 1096 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 B3GAT3O94766 335 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 DDHD2O94830 711 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 ZRANB2O95218 330 aaKnown RBP eCLIP11.69□□□□□ -0.54
PDPN-202ENST00000376057 CCDC130P13994 396 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 TAS2R40P59535 323 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 CCNI2Q6ZMN8 369 aaPredicted RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 BEND5Q7L4P6 421 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 JOSD2Q8TAC2 188 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 TEKT4Q8WW24 435 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 PAAF1Q9BRP4 392 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 FAM129AQ9BZQ8 928 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 METTL5Q9NRN9 209 aaKnown RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 FAM49BQ9NUQ9 324 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 TTC3P53804 2025 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 EFCAB14O75071 495 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 EFEMP2O95967 443 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 DESP17661 470 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 PSMA2P25787 234 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 TKTP29401 623 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 CLCN6P51797 869 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 TLE2Q04725 743 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 MRPL58Q14197 206 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 BNIPLQ7Z465 357 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 IFT20Q8IY31 132 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 ARFGAP1Q8N6T3 406 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 FAM71BQ8TC56 605 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 TBCBQ99426 244 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 PRDM16Q9HAZ2 1276 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 SMARCAL1Q9NZC9 954 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 F8VP50 259 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 LRCH4O75427 683 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 ENDOD1O94919 500 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 RHOXF2BP0C7M4 288 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 TRIM60Q495X7 471 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 FAM102AQ5T9C2 384 aaPredicted RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 CLEC20AQ6ZU45 233 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 SYDE1Q6ZW31 735 aaPredicted RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 CMASQ8NFW8 434 aaPredicted RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 IRGQQ8WZA9 623 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 NT5C3BQ969T7 300 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 RHOXF2Q9BQY4 288 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 COLEC11Q9BWP8 271 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 C11orf49Q9H6J7 331 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 KIAA0355O15063 1070 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 ELAVL2Q12926 359 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 NNTQ13423 1086 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 OR6B2Q6IFH4 312 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 CPNE8Q86YQ8 564 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 PSTKQ8IV42 348 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 SLITRK1Q96PX8 696 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 KRT12Q99456 494 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 DDX23Q9BUQ8 820 aaKnown RBP11.68□□□□□ -0.54
PDPN-202ENST00000376057 ARFGAP3Q9NP61 516 aa11.68□□□□□ -0.54
PDPN-202ENST00000376057 C3orf70A6NLC5 250 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 HCRTO43612 131 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 RNF8O76064 485 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 CLTBP09497 229 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 IGFBP6P24592 240 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 GBP1P32455 592 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 VSNL1P62760 191 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 SMARCB1Q12824 385 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 CUL1Q13616 776 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 TCTN1Q2MV58 587 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 MDH1BQ5I0G3 518 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 BEND6Q5SZJ8 279 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 OVOS1Q6IE37 1185 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 TMCO3Q6UWJ1 677 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 PHLDB2Q86SQ0 1253 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 PRELID2Q8N945 189 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 SLC2A13Q96QE2 648 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 CNGB3Q9NQW8 809 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 RRN3Q9NYV6 651 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 FEZ2Q9UHY8 353 aaPredicted RBP11.67□□□□□ -0.54
PDPN-202ENST00000376057 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 COL4A6Q14031 1691 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 ABHD14A-ACY1A0A1B0GW23 586 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 HHLA1C9JL84 531 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 TULP2O00295 520 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 HSF2BPO75031 334 aa11.67□□□□□ -0.54
PDPN-202ENST00000376057 ATP2C2O75185 946 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms