RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
CLIC1-207ENST00000375780 INTS2Q9H0H0 1204 aaKnown RBP12.68□□□□□ -0.38
CLIC1-207ENST00000375780 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
CLIC1-207ENST00000375780 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
CLIC1-207ENST00000375780 SAMSN1Q9NSI8 373 aaKnown RBP12.68□□□□□ -0.38
CLIC1-207ENST00000375780 FAM49BQ9NUQ9 324 aa12.68□□□□□ -0.38
CLIC1-207ENST00000375780 MAGED2Q9UNF1 606 aaPredicted RBP12.68□□□□□ -0.38
CLIC1-207ENST00000375780 TECTAO75443 2155 aa12.68□□□□□ -0.38
CLIC1-207ENST00000375780 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 AP1G2O75843 785 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 FAM200BP0CF97 657 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.382e-14■□□□□ 9.3
CLIC1-207ENST00000375780 CDC25BP30305 580 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 RAD23BP54727 409 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 ZXDAP98168 799 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 EXOC3L4Q17RC7 722 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 ZNF394Q53GI3 561 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 HSP90AA4PQ58FG1 418 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 CDKAL1Q5VV42 579 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 SMYD5Q6GMV2 418 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 ENOSF1Q7L5Y1 443 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 UBR7Q8N806 425 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 SLC4A11Q8NBS3 891 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
CLIC1-207ENST00000375780 EDAQ92838 391 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 SMARCD2Q92925 531 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 CYFIP2Q96F07 1278 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 ASB16Q96NS5 453 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 C1QTNF1Q9BXJ1 281 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 NDST4Q9H3R1 872 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 NUMBLQ9Y6R0 609 aa12.67□□□□□ -0.38
CLIC1-207ENST00000375780 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
CLIC1-207ENST00000375780 ECI2O75521 394 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 RTN3O95197 1032 aaPredicted RBP12.66□□□□□ -0.38
CLIC1-207ENST00000375780 F11P03951 625 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 TPM2P07951 284 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 ZNF18P17022 549 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 GJA1P17302 382 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 GPR158Q5T848 1215 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 TRIM65Q6PJ69 517 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 PARM1Q6UWI2 310 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 ANKRD20A12PQ8NF67 263 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 FGF14Q92915 247 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 E2F7Q96AV8 911 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 HEXIM2Q96MH2 286 aaKnown RBP12.66□□□□□ -0.38
CLIC1-207ENST00000375780 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 TRPV4Q9HBA0 871 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 ZFP14Q9HCL3 533 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 CSNK1G1Q9HCP0 422 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 TMEM30AQ9NV96 361 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 KIAA1257Q9ULG3 409 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 DUSP12Q9UNI6 340 aa12.66□□□□□ -0.38
CLIC1-207ENST00000375780 PES1O00541 588 aaKnown RBP12.65□□□□□ -0.38
CLIC1-207ENST00000375780 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-207ENST00000375780 PAEPP09466 180 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 ADORA2BP29275 332 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 WEE1P30291 646 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 PPP3CCP48454 512 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 SIGLEC14Q08ET2 396 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 FAM78AQ5JUQ0 283 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 ARHGAP17Q68EM7 881 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 ARHGEF19Q8IW93 802 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 SLC44A3Q8N4M1 653 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 STKLD1Q8NE28 680 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
CLIC1-207ENST00000375780 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
CLIC1-207ENST00000375780 VDRP11473 427 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 SRFP11831 508 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 NPR3P17342 541 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 PFKLP17858 780 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 ACO1P21399 889 aaKnown RBP12.64□□□□□ -0.39
CLIC1-207ENST00000375780 PDE6CP51160 858 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 SLC8A3P57103 927 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 CYP4F8P98187 520 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 FANCCQ00597 558 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 PPP1R26Q5T8A7 1209 aaPredicted RBP12.64□□□□□ -0.39
CLIC1-207ENST00000375780 PHLDB3Q6NSJ2 640 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 CLEC20AQ6ZU45 233 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 RRAGAQ7L523 313 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 TMEM150AQ86TG1 271 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 PDZD8Q8NEN9 1154 aa12.64□□□□□ -0.39
CLIC1-207ENST00000375780 DEPDC1BQ8WUY9 529 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms