RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MAPK4P31152 587 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ARFIP2P53365 341 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 INHBCP55103 352 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 DSG1Q02413 1049 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 CENPCQ03188 943 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 DMP1Q13316 513 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 KLF1Q13351 362 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 FBXO16Q8IX29 292 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 DNERQ8NFT8 737 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 FNBP1Q96RU3 617 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 CENPKQ9BS16 269 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 TMEM120AQ9BXJ8 343 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 TRIM55Q9BYV6 548 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 COMMD3-BMI1R4GMX3 469 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 GLTPD2A6NH11 291 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 A8MXQ7 604 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.24
MSH5-204ENST00000375755 EDN1P05305 212 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 IMPDH2P12268 514 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 CDK16Q00536 496 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 GJC2Q5T442 439 aaPredicted RBP13.52□□□□□ -0.24
MSH5-204ENST00000375755 FBXO27Q8NI29 283 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 ZNF668Q96K58 619 aaPredicted RBP13.52□□□□□ -0.24
MSH5-204ENST00000375755 PDGFCQ9NRA1 345 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.24
MSH5-204ENST00000375755 DNAJC6O75061 913 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 PIAS1O75925 651 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 USP1O94782 785 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 MAPTP10636 758 aaKnown RBP13.52□□□□□ -0.25
MSH5-204ENST00000375755 VAMP7P51809 220 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 MARK2Q7KZI7 788 aaKnown RBP13.52□□□□□ -0.25
MSH5-204ENST00000375755 LCA5Q86VQ0 697 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 CCDC28BQ9BUN5 200 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 ARMCX1Q9P291 453 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 SLC17A7Q9P2U7 560 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 TMCO1Q9UM00 188 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.52□□□□□ -0.25
MSH5-204ENST00000375755 LRRC37A2A6NM11 1700 aa13.52□□□□□ -0.25
MSH5-204ENST00000375755 A6NJR5 290 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 RAP1GDS1P52306 607 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 WNT7BP56706 349 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CDC16Q13042 620 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 PPIL2Q13356 520 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 KRT72Q14CN4 511 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CCNG2Q16589 344 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 LMBRD2Q68DH5 695 aaPredicted RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CCDC62Q6P9F0 684 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 SLC9A9Q8IVB4 645 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 RBM12BQ8IXT5 1001 aaKnown RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 XXYLT1Q8NBI6 393 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 OSBPL8Q9BZF1 889 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 PSMC3IPQ9P2W1 217 aaPredicted RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 MAFBQ9Y5Q3 323 aaPredicted RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CXCL11O14625 94 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CALCAP01258 141 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 EDNRBP24530 442 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 USP46P62068 366 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 EMC2Q15006 297 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 EFTUD2Q15029 972 aaKnown RBP eCLIP13.51□□□□□ -0.259e-10■■■■■ 39.2
MSH5-204ENST00000375755 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 RDM1Q8NG50 284 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 TCP10LQ8TDR4 215 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 ZBTB45Q96K62 511 aaPredicted RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 KLF6Q99612 283 aaPredicted RBP13.51□□□□□ -0.25
MSH5-204ENST00000375755 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 SCN4AP35499 1836 aa13.51□□□□□ -0.25
MSH5-204ENST00000375755 GOLGA8RI6L899 631 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 FCHO1O14526 889 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 BANF1O75531 89 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 CYP11B1P15538 503 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ICAM3P32942 547 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 TCF7P36402 384 aaPredicted RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 GRIA2P42262 883 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 CCDC142Q17RM4 750 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.5□□□□□ -0.25
MSH5-204ENST00000375755 NAT14Q8WUY8 206 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 SEMA4DQ92854 862 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 VTI1AQ96AJ9 217 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 CYTH2Q99418 400 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 TTC1Q99614 292 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 TSSK1BQ9BXA7 367 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms