RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZACNQ401N2 412 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 MROH9Q5TGP6 573 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 SLC9A9Q8IVB4 645 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 PPWD1Q96BP3 646 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 LBHD1Q9BQE6 289 aaPredicted RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 APOBEC2Q9Y235 224 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 PDE2AO00408 941 aaPredicted RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 CCDC130P13994 396 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 H2AFXP16104 143 aaPredicted RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 MLH1P40692 756 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PTENP60484 403 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PLPPR4Q7Z2D5 763 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 EXD1Q8NHP7 514 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 SEPT8Q92599 483 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PCMTD2Q9NV79 361 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 TMEM120BA0PK00 339 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 HARS2P49590 506 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 INHBEP58166 350 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 WDR93Q6P2C0 686 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 FRA10AC1Q70Z53 315 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PPIL6Q8IXY8 311 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 TFB1MQ8WVM0 346 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 LRRC37BQ96QE4 947 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 NDFIP2Q9NV92 336 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 HACD3Q9P035 362 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 LSM7Q9UK45 103 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 TNFSF13BQ9Y275 285 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 LHX1P48742 406 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 ERFP50548 548 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 ART3Q13508 389 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 SKIV2LQ15477 1246 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 DENND5BQ6ZUT9 1274 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 LNX1Q8TBB1 728 aaPredicted RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 HNRNPLLQ8WVV9 542 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 GPR20Q99678 358 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 VCXQ9H320 206 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PABPC3Q9H361 631 aaKnown RBP18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 CATSPERBQ9H7T0 1116 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 C10orf88Q9H8K7 445 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 CDY2AQ9Y6F7 541 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 RARAP10276 462 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PRKCIP41743 596 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 ARFIP2P53365 341 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 PTK7Q13308 1070 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 DEFB115Q30KQ5 88 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 CREG2Q8IUH2 290 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 TXLNGQ9NUQ3 528 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 UBP1Q9NZI7 540 aa18.7■□□□□ 0.58
PTPDC1-202ENST00000375360 CNTNAP2Q9UHC6 1331 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 ARF4P18085 180 aaPredicted RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 SP3Q02447 781 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 ATP13A4Q4VNC1 1196 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 RUBCNQ92622 972 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 PTPRN2Q92932 1015 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 LPPQ93052 612 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 LENG1Q96BZ8 264 aaPredicted RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 C20orf96Q9NUD7 363 aaPredicted RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 STK25O00506 426 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM171A1Q5VUB5 890 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 DENND1BQ6P3S1 775 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 TADA2BQ86TJ2 420 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 STKLD1Q8NE28 680 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 H0Y3Z8 333 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 SNX2O60749 519 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 JCHAINP01591 159 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 CYBBP04839 570 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 PLA2G4AP47712 749 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 MTHFD1LQ6UB35 978 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 TTC30BQ8N4P2 665 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 EPS8L3Q8TE67 593 aaKnown RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 SENP8Q96LD8 212 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 CCT8L2Q96SF2 557 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 SAE1Q9UBE0 346 aaPredicted RBP18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 TOPAZ1Q8N9V7 1692 aa18.69■□□□□ 0.58
PTPDC1-202ENST00000375360 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 TBKBP1A7MCY6 615 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 LYPLA2O95372 231 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 ELNP15502 786 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 USP10Q14694 798 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 SHC3Q92529 594 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 SEMA4DQ92854 862 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 SEMA4AQ9H3S1 761 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 PSMC3IPQ9P2W1 217 aaPredicted RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 FZD9O00144 591 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 CKMP06732 381 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 MAP3K21Q5TCX8 1036 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 IRF2BP2Q7Z5L9 587 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 CELF6Q96J87 481 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 YME1L1Q96TA2 773 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 RPSAP08865 295 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 NCKAP1LP55160 1127 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 SNCBQ16143 134 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 BMT2Q1RMZ1 405 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 KIF19Q2TAC6 998 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 ANO4Q32M45 955 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 337.8 ms