RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 APOC1P02654 83 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 MAPKAPK2P49137 400 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZNF844Q08AG5 666 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 TFCP2Q12800 502 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 METTL21CQ5VZV1 264 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SRBD1Q8N5C6 995 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 OR8H1Q8NGG4 311 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 BBS4Q96RK4 519 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 CD320Q9NPF0 282 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 FAM86C1Q9NVL1 165 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ARHGEF38Q9NXL2 777 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 GGT7Q9UJ14 662 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 TOP3BO95985 862 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 ECT2LQ008S8 904 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SMCO1Q147U7 214 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 NECTIN1Q15223 517 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ACOT12Q8WYK0 555 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 MS4A14Q96JA4 679 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 CYTH4Q9UIA0 394 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 KCNE2Q9Y6J6 123 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ABCB11O95342 1321 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 LDOC1O95751 146 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZNF394Q53GI3 561 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 HSD17B12Q53GQ0 312 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SPDYAQ5MJ70 313 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ELMOD2Q8IZ81 293 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 CYP4Z2PQ8N1L4 340 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SNX27Q96L92 541 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ERGIC2Q96RQ1 377 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 PADI4Q9UM07 663 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SF3B1O75533 1304 aaKnown RBP eCLIP6.84□□□□□ -1.311e-6■■■■■ 58.7
UBR4-204ENST00000375254 A0A0X1KG70 313 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 FAM83EQ2M2I3 478 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 DEPDC4Q8N2C3 294 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 APOL2Q9BQE5 337 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 NMRK1Q9NWW6 199 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 HTR3EA5X5Y0 456 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 MDM4O15151 490 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SOX5P35711 763 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 COILP38432 576 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 CYP4F8P98187 520 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 MSLNQ13421 630 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZNF827Q17R98 1081 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 BOLA3Q53S33 107 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 KBTBD2Q8IY47 623 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 DDX17Q92841 729 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 NEDD4LQ96PU5 975 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SSNA1O43805 119 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZAP70P43403 619 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 CYP2J2P51589 502 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ARCQ7LC44 396 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 KCNK18Q7Z418 384 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 RAG1P15918 1043 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 PDGFRAP16234 1089 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 DEPTORQ8TB45 409 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 EPB41L4BQ9H329 900 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 PNPLA8Q9NP80 782 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZNF446Q9NWS9 450 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 GARTP22102 1010 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 PRCPP42785 496 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 KCNH2Q12809 1159 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 TMEM17Q86X19 198 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 CCDC185Q8N715 623 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZHX1-C8orf76Q96EF9 292 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 RANBP3Q9H6Z4 567 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 RMND5AQ9H871 391 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 MLXIPQ9HAP2 919 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 GINM1Q9NU53 330 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 VPS9D1Q9Y2B5 631 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 TFECO14948 347 aaPredicted RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 HOXD12P35452 270 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 FAUP35544 74 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 CCDC58Q4VC31 144 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 PAGE2Q7Z2X7 111 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 TSEN34Q9BSV6 310 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 PRPF19Q9UMS4 504 aaKnown RBP6.84□□□□□ -1.31
UBR4-204ENST00000375254 ACCSLQ4AC99 568 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 PPIL6Q8IXY8 311 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 RDM1Q8NG50 284 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 KIAA1024Q9UPX6 916 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 SERPINE1P05121 402 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 TSHRP16473 764 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 CHRNDQ07001 517 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 ARID3BQ8IVW6 561 aaPredicted RBP6.84□□□□□ -1.32
UBR4-204ENST00000375254 GSPT2Q8IYD1 628 aaKnown RBP6.84□□□□□ -1.32
UBR4-204ENST00000375254 TIPINQ9BVW5 301 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 C14orf93Q9H972 538 aaKnown RBP6.84□□□□□ -1.32
UBR4-204ENST00000375254 CNOT8Q9UFF9 292 aaKnown RBP6.84□□□□□ -1.32
UBR4-204ENST00000375254 MAD2L2Q9UI95 211 aa6.84□□□□□ -1.32
UBR4-204ENST00000375254 DFNA5O60443 496 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 BTN3A2P78410 334 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 CDKL3Q8IVW4 592 aaPredicted RBP6.83□□□□□ -1.32
UBR4-204ENST00000375254 SMYD1Q8NB12 490 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 DPF3Q92784 378 aa6.83□□□□□ -1.32
UBR4-204ENST00000375254 ERVK-11Q9UQG0 969 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms