RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FAM161BQ96MY7 647 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 SLC25A27O95847 323 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MT-ND3P03897 115 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 EIF2AK2P19525 551 aaKnown RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 BGNP21810 368 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 PGM1P36871 562 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 ARL4CP56559 192 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 CDK16Q00536 496 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 FBXL18Q96ME1 805 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 FAM111AQ96PZ2 611 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 SPATC1LQ9H0A9 340 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 VPS11Q9H270 941 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 PCDH9Q9HC56 1237 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 TM9SF1O15321 606 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 CNMDO75829 334 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 UBTFL6P0CB48 400 aaPredicted RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MYL2P10916 166 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 PSMC5P62195 406 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 OASLQ15646 514 aaKnown RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 KLHL38Q2WGJ6 581 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 SPRYD7Q5W111 196 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 TRIM72Q6ZMU5 477 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 BANPQ8N9N5 519 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 FGD4Q96M96 766 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 TIPINQ9BVW5 301 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 BTBD7Q9P203 1132 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 MTO1Q9Y2Z2 717 aaKnown RBP11.61□□□□□ -0.55
CCDC40-203ENST00000374877 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
CCDC40-203ENST00000374877 COL11A1P12107 1806 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 ACOT2P49753 483 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 BAATQ14032 418 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 MDH1BQ5I0G3 518 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CST9Q5W186 159 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 DRICH1Q6PGQ1 229 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 C4orf19Q8IY42 314 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF276Q8N554 614 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SSU72Q9NP77 194 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 PXMP2Q9NR77 195 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 WDR35Q9P2L0 1181 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 IKBKGQ9Y6K9 419 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SRCAPQ6ZRS2 3230 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 FCHO1O14526 889 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 AMPD1P23109 780 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 MRPS9P82933 396 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CUL2Q13617 745 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 RASA2Q15283 850 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 TFDP3Q5H9I0 405 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CCNJLQ8IV13 435 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SKA1Q96BD8 255 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 TAAR1Q96RJ0 339 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 DDX50Q9BQ39 737 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 ACSS3Q9H6R3 686 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 STX18Q9P2W9 335 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 DRG1Q9Y295 367 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 hCG_1818297A0A087WSY0 165 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 H3BRJ5 948 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 LYPLA2O95372 231 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SERPINB4P48594 390 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 GDF10P55107 478 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 WNT7BP56706 349 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 AP1B1Q10567 949 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 PGM5Q15124 567 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 DNAJC24Q6P3W2 148 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 PHF13Q86YI8 300 aaPredicted RBP11.6□□□□□ -0.55
CCDC40-203ENST00000374877 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 SHCBP1Q8NEM2 672 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CPT1BQ92523 772 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 GBP5Q96PP8 586 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 PDCD2LQ9BRP1 358 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 CHMP2BQ9UQN3 213 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 LOXHD1Q8IVV2 1947 aa11.6□□□□□ -0.55
CCDC40-203ENST00000374877 FAM237BA0A1B0GVD1 139 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 KLHL33A6NCF5 533 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 MAGEA13PA6NCF6 341 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 B2RBV5 119 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 STAM2O75886 525 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZCCHC18P0CG32 403 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 LIG4P49917 911 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 MCL1Q07820 350 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 SMTNL2Q2TAL5 461 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 SYCP2LQ5T4T6 812 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ALYREFQ86V81 257 aaKnown RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ARHGAP24Q8N264 748 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
CCDC40-203ENST00000374877 RSAD2Q8WXG1 361 aa11.59□□□□□ -0.55
CCDC40-203ENST00000374877 ALKBH8Q96BT7 664 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms