RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 KLHL38Q2WGJ6 581 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ZC3H12AQ5D1E8 599 aaKnown RBP14.62□□□□□ -0.07
HMGCL-203ENST00000374490 EFHC2Q5JST6 749 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 CCDC91Q7Z6B0 441 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 INO80BQ9C086 356 aaPredicted RBP14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ASB7Q9H672 318 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 RXFP1Q9HBX9 757 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ABCF3Q9NUQ8 709 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 ASNSD1Q9NWL6 643 aa14.62□□□□□ -0.07
HMGCL-203ENST00000374490 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.62□□□□□ -0.07
HMGCL-203ENST00000374490 LRCH4O75427 683 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 RNF8O76064 485 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 ARIH2O95376 493 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 TAC1P20366 129 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 RFC1P35251 1148 aaPredicted RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 PCK1P35558 622 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 RAD23BP54727 409 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 OTUD4Q01804 1114 aaKnown RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 MBTD1Q05BQ5 628 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 MYO1EQ12965 1108 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 BNIP1Q12981 228 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 PDIA2Q13087 525 aaKnown RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 ZNF484Q5JVG2 852 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 ARMCX2Q7L311 632 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 PRUNE1Q86TP1 453 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 XYLT1Q86Y38 959 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 FBXO16Q8IX29 292 aaPredicted RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 ZBED8Q8IZ13 594 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 GLIS1Q8NBF1 620 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 ACTL9Q8TC94 416 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 RSAD2Q8WXG1 361 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 MCRS1Q96EZ8 462 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 NLRP4Q96MN2 994 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 SPATA33Q96N06 139 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 NXF1Q9UBU9 619 aaKnown RBP14.61□□□□□ -0.07
HMGCL-203ENST00000374490 CPA4Q9UI42 421 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 KIAA1257Q9ULG3 409 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 STARD13Q9Y3M8 1113 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 HTTP42858 3142 aa14.61□□□□□ -0.07
HMGCL-203ENST00000374490 E7ESA3 106 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 APOC4-APOC2K7ER74 178 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 CST8O60676 142 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 ATP5HO75947 161 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 UBOX5O94941 541 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 ASMTLO95671 621 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 IFNB1P01574 187 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 APOC2P02655 101 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 HMGCRP04035 888 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 KRT19P08727 400 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 VDRP11473 427 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 ATP2A2P16615 1042 aaKnown RBP14.6□□□□□ -0.07
HMGCL-203ENST00000374490 KRT15P19012 456 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 GCAP28676 217 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 PSMC4P43686 418 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 GEMIN4P57678 1058 aaKnown RBP14.6□□□□□ -0.07
HMGCL-203ENST00000374490 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
HMGCL-203ENST00000374490 TTLL4Q14679 1199 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 WDR72Q3MJ13 1102 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 FAM133BQ5BKY9 247 aaKnown RBP14.6□□□□□ -0.07
HMGCL-203ENST00000374490 TXNRD3NBQ6F5E7 133 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 EFCAB12Q6NXP0 572 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 C17orf99Q6UX52 265 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 RPAINQ86UA6 219 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 DENND1AQ8TEH3 1009 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 FBF1Q8TES7 1133 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 TMEM121Q9BTD3 319 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 PITPNM3Q9BZ71 974 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 ZWILCHQ9H900 591 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 METTL5Q9NRN9 209 aaKnown RBP14.6□□□□□ -0.07
HMGCL-203ENST00000374490 POLIQ9UNA4 740 aa14.6□□□□□ -0.07
HMGCL-203ENST00000374490 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-203ENST00000374490 POC1B-GALNT4F8VUJ3 575 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 MCF2LO15068 1137 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 CILPO75339 1184 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 ECM2O94769 699 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-203ENST00000374490 ZWINTO95229 277 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 STAU1O95793 577 aaKnown RBP14.59□□□□□ -0.07
HMGCL-203ENST00000374490 CXCL8P10145 99 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 ETS1P14921 441 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 GBP2P32456 591 aaPredicted RBP14.59□□□□□ -0.07
HMGCL-203ENST00000374490 NCALDP61601 193 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 TFDP2Q14188 446 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 STILQ15468 1287 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 PDK4Q16654 411 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 ZNF792Q3KQV3 632 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 HSDL1Q3SXM5 330 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 FAM47CQ5HY64 1035 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 TMEM63BQ5T3F8 832 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 SCARA3Q6AZY7 606 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 CCDC62Q6P9F0 684 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 GPR142Q7Z601 462 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 PLEKHH3Q7Z736 793 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 DPP9Q86TI2 863 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 NT5DC4Q86YG4 428 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 RFX6Q8HWS3 928 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 NAT8LQ8N9F0 302 aa14.59□□□□□ -0.07
HMGCL-203ENST00000374490 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms