RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAM172AQ8WUF8 416 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 P3H4Q92791 437 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 BAIAP2L1Q9UHR4 511 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 MFHAS1Q9Y4C4 1052 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 LRCH4O75427 683 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 FAM155BO75949 473 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 C22orf31O95567 290 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 CETPP11597 493 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 NDUFV1P49821 464 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 ZNF252P-AS1Q0IIN9 211 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 OLIG2Q13516 323 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 SPARCL1Q14515 664 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 HVCN1Q96D96 273 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 PTPN18Q99952 460 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 NT5C1AQ9BXI3 368 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 SLCO1B3Q9NPD5 702 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 MARCOQ9UEW3 520 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 NAALADL1Q9UQQ1 740 aa11.32□□□□□ -0.6
CXCL12-203ENST00000374429 FNDC3AQ9Y2H6 1198 aaKnown RBP11.32□□□□□ -0.6
CXCL12-203ENST00000374429 A0A1W2PPM1 405 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 MCF2LO15068 1137 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 MOCS2O96007 188 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SRGAP2BP0DMP2 458 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 YWHAEP62258 255 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 PPIL2Q13356 520 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 CA9Q16790 459 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 TLK2Q86UE8 772 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 USP33Q8TEY7 942 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 TTC17Q96AE7 1141 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SLITRK1Q96PX8 696 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 MROH8Q9H579 483 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 NINJ2Q9NZG7 142 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 TMEM191CA6NGB0 347 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 P4HA1P13674 534 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SDC4P31431 198 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 POU5F1Q01860 360 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SPRED3Q2MJR0 410 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SLC4A11Q8NBS3 891 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GRK7Q8WTQ7 553 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 XPO6Q96QU8 1125 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 DDX20Q9UHI6 824 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 XPO7Q9UIA9 1087 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 HMGCRP04035 888 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 CA8P35219 290 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GMPRP36959 345 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 CCNHP51946 323 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 RBP5P82980 135 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 AP1B1Q10567 949 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 AUHQ13825 339 aaKnown RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SLMAPQ14BN4 828 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 TFDP3Q5H9I0 405 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 MDH1BQ5I0G3 518 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 HHATQ5VTY9 493 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SPNS2Q8IVW8 549 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SEC16BQ96JE7 1060 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GAD1Q99259 594 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SH3GL2Q99962 352 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 GCOM2Q9BZD3 368 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-203ENST00000374429 PSD3Q9NYI0 1048 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 SSC5DA1L4H1 1573 aa11.31□□□□□ -0.6
CXCL12-203ENST00000374429 H0YGN5 161 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 KCNK1O00180 336 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 CYP1A1P04798 512 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 MAP3K7CLP57077 242 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 PITX1P78337 314 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 C11orf91Q3C1V1 193 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 PPP1R36Q96LQ0 422 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 TRAIPQ9BWF2 469 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 XYLT2Q9H1B5 865 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 NFS1Q9Y697 457 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 DOCK3Q8IZD9 2030 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 KIAA1217Q5T5P2 1943 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms