RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RAB27AP51159 221 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 LMNB2Q03252 620 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 KCNA10Q16322 511 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 HSP90B2PQ58FF3 399 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 SCML4Q8N228 414 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 CCHCR1Q8TD31 782 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 NCAPGQ9BPX3 1015 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 SRRDQ9UH36 339 aa13.21□□□□□ -0.29
PRPF4-202ENST00000374199 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.3
PRPF4-202ENST00000374199 TULP2O00295 520 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 GPD1P21695 349 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 MIPP30301 263 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 RPL9P32969 192 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 KCNJ1P48048 391 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 BCAT1P54687 386 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 PLCB3Q01970 1234 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 SLMAPQ14BN4 828 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 RSPH3Q86UC2 560 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 TBCBQ99426 244 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 XPO1O14980 1071 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 GPR182O15218 404 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 PGK1P00558 417 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 LMO2P25791 158 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 UPP1Q16831 310 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 KIAA0319Q5VV43 1072 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 CCDC105Q8IYK2 499 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 TMEM86AQ8N2M4 240 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 PGM2Q96G03 612 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 ADAM33Q9BZ11 813 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 OSBPL7Q9BZF2 842 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 TSPYL1Q9H0U9 437 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 DPH5Q9H2P9 285 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 MGEA5O60502 916 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 KRT14P02533 472 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 KRT1P04264 644 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 PMS2P54278 862 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 LPIN1Q14693 890 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 GLRA4Q5JXX5 417 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 ZNF618Q5T7W0 954 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 OTUD1Q5VV17 481 aaPredicted RBP13.2□□□□□ -0.3
PRPF4-202ENST00000374199 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 EURLQ9NYK6 297 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
PRPF4-202ENST00000374199 CENPFP49454 3210 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 A0A0U1RQF3 1178 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 TKTP29401 623 aaKnown RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 ACADSBP45954 432 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 SP3Q02447 781 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 LHX8Q68G74 356 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 BBOF1Q8ND07 529 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 IPO4Q8TEX9 1081 aaKnown RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 USP3Q9Y6I4 520 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 M0QZQ0 153 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 POLR3GO15318 223 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 RIPK2O43353 540 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
PRPF4-202ENST00000374199 PDE4CQ08493 712 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 APPL2Q8NEU8 664 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 CSNK1G1Q9HCP0 422 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 MIOSQ9NXC5 875 aa13.19□□□□□ -0.3
PRPF4-202ENST00000374199 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GAS8O95995 478 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GYS2P54840 703 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 SNX16P57768 344 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 FAM189BP81408 668 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 DPYSL3Q14195 570 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 ADGRF2Q8IZF7 708 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 CCDC89Q8N998 374 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 B3GALNT2Q8NCR0 500 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms