RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 USP18Q9UMW8 372 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 EFR3BQ9Y2G0 817 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 RARGP13631 454 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 PDGFRAP16234 1089 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 CCND3P30281 292 aaPredicted RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 LRPAP1P30533 357 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 PCK1P35558 622 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 LILRA4P59901 499 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 TAF5Q15542 800 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 PRUNE1Q86TP1 453 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 CCDC89Q8N998 374 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 CMASQ8NFW8 434 aaPredicted RBP20.57■□□□□ 0.88
HDAC1-201ENST00000373548 STK32AQ8WU08 396 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 HAUS1Q96CS2 278 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 PEBP4Q96S96 227 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 SNX25Q9H3E2 840 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 CENPHQ9H3R5 247 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 FAM105AQ9NUU6 356 aa20.57■□□□□ 0.88
HDAC1-201ENST00000373548 ASGR1P07306 291 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 CD48P09326 243 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 EIF3BP55884 814 aaKnown RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 LMNB2Q03252 620 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 MGAT3Q09327 533 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 C15orf59Q2T9L4 293 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 RAB6CQ53S08 254 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 DENND2CQ68D51 928 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 KHSRPQ92945 711 aaKnown RBP eCLIP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 RAB6CQ9H0N0 254 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 PAPSS1O43252 624 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SHOX2O60902 331 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SHBGP04278 402 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 ADORA2BP29275 332 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SKOR1P84550 965 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SLC6A3Q01959 620 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SLC29A2Q14542 456 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 OASLQ15646 514 aaKnown RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 CYP4V2Q6ZWL3 525 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 GSTA5Q7RTV2 222 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 CCDC25Q86WR0 208 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 SCUBE3Q8IX30 993 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 ADGRF2Q8IZF7 708 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 NKD2Q969F2 451 aaPredicted RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 ZNF148Q9UQR1 794 aa20.56■□□□□ 0.88
HDAC1-201ENST00000373548 DRG1Q9Y295 367 aaKnown RBP20.56■□□□□ 0.88
HDAC1-201ENST00000373548 HUS1O60921 280 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 ELNP15502 786 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 CHKAP35790 457 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 VCPP55072 806 aaKnown RBP20.55■□□□□ 0.88
HDAC1-201ENST00000373548 CAV1Q03135 178 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 IFFO1Q0D2I5 559 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 KCNA10Q16322 511 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 KRT71Q3SY84 523 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 BBS12Q6ZW61 710 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 RPAINQ86UA6 219 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 OSTM1Q86WC4 334 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 ANKRD52Q8NB46 1076 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 GLIS1Q8NBF1 620 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 GSTCDQ8NEC7 633 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 KLHDC9Q8NEP7 349 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 HSPH1Q92598 858 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 B3GNT5Q9BYG0 378 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 OSBPL7Q9BZF2 842 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 ANAPC5Q9UJX4 755 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 GRIN2DO15399 1336 aa20.55■□□□□ 0.88
HDAC1-201ENST00000373548 DPYSL4O14531 572 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 MYCNP04198 464 aaPredicted RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 PRKAR2AP13861 404 aaKnown RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 NR1D1P20393 614 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 IGFBP6P24592 240 aaPredicted RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 BCAT1P54687 386 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 BST2Q10589 180 aaKnown RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CCDC14Q49A88 953 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 AGBL2Q5U5Z8 902 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 EMC10Q5UCC4 262 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 KDM7AQ6ZMT4 941 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 ALLCQ8N6M5 410 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 TOP6BLQ8N6T0 577 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 KCTD6Q8NC69 237 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 SMC1BQ8NDV3 1235 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 SLC35B2Q8TB61 432 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CFAP57Q96MR6 1250 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CHST12Q9NRB3 414 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 RNF186Q9NXI6 227 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 RIPK2O43353 540 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CST8O60676 142 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 AOC2O75106 756 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 WARSP23381 471 aaKnown RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 MLH1P40692 756 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 DYNLT1P63172 113 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CDO1Q16878 200 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CCSAPQ6IQ19 270 aaPredicted RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 GAD1Q99259 594 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 SAE1Q9UBE0 346 aaPredicted RBP20.54■□□□□ 0.88
HDAC1-201ENST00000373548 CACNG4Q9UBN1 327 aa20.54■□□□□ 0.88
HDAC1-201ENST00000373548 ACTN2P35609 894 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 ATP1A2P50993 1020 aa20.53■□□□□ 0.88
HDAC1-201ENST00000373548 AFF1P51825 1210 aaKnown RBP20.53■□□□□ 0.88
HDAC1-201ENST00000373548 IZUMO3Q5VZ72 239 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms