RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PTK6Q13882 451 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 PPP2R5EQ16537 467 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 IZUMO3Q5VZ72 239 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 KIAA0319LQ8IZA0 1049 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 HVCN1Q96D96 273 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 SCLT1Q96NL6 688 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 TMEM121Q9BTD3 319 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 MINDY3Q9H8M7 445 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 LUZP4Q9P127 313 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 A6NNZ2 444 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 MSCO60682 206 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 GGPS1O95749 300 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 AGTP01019 485 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 VARSP26640 1264 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 GCAP28676 217 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 ALDH5A1P51649 535 aaPredicted RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 MNAT1P51948 309 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 GDF10P55107 478 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 SNRPFP62306 86 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 TFAMQ00059 246 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 VGLL4Q14135 290 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 EFTUD2Q15029 972 aaKnown RBP eCLIP6.72□□□□□ -1.331e-8■■■■■ 33.8
CHD6-202ENST00000373222 STXBP2Q15833 593 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 PROX2Q3B8N5 592 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 TUBB8Q3ZCM7 444 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 OXLD1Q5BKU9 147 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 EEF1DP3Q658K8 133 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 PLEKHA7Q6IQ23 1121 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 CGB2Q6NT52 195 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 GPAT2Q6NUI2 795 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 GSTA5Q7RTV2 222 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 YTHDF3Q7Z739 585 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 ARFGAP1Q8N6T3 406 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 UBR7Q8N806 425 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 NLGN2Q8NFZ4 835 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 JOSD2Q8TAC2 188 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 SLC7A3Q8WY07 619 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 ASPSCR1Q9BZE9 553 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 C17orf75Q9HAS0 396 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.72□□□□□ -1.332e-14■□□□□ 9.2
CHD6-202ENST00000373222 NXF1Q9UBU9 619 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 ZNF112Q9UJU3 913 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
CHD6-202ENST00000373222 PNMA3Q9UL41 463 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 STYXL1Q9Y6J8 313 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 LOC285556D6RIA3 1793 aa6.72□□□□□ -1.33
CHD6-202ENST00000373222 ZBTB42B2RXF5 422 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 RASSF9O75901 435 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 MAP3K6O95382 1288 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 IFNB1P01574 187 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 KLRC2P26717 231 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 IL1R2P27930 398 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 MGAT5Q09328 741 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 SLMAPQ14BN4 828 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 TMED2Q15363 201 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 GNPTABQ3T906 1256 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 NUGGCQ68CJ6 796 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 FAM47EQ6ZV65 393 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 PIGWQ7Z7B1 504 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 NCAPG2Q86XI2 1143 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 RNF149Q8NC42 400 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 RDM1Q8NG50 284 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 ERP27Q96DN0 273 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 CLMNQ96JQ2 1002 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 RMDN2Q96LZ7 410 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 TWNKQ96RR1 684 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 RBM15Q96T37 977 aaKnown RBP eCLIP6.71□□□□□ -1.331e-7■■■□□ 14.6
CHD6-202ENST00000373222 CGRRF1Q99675 332 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 CXCL16Q9H2A7 254 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 ZWILCHQ9H900 591 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 CNOT10Q9H9A5 744 aaKnown RBP6.71□□□□□ -1.33
CHD6-202ENST00000373222 CISHQ9NSE2 258 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 GINM1Q9NU53 330 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 CLIC5Q9NZA1 410 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 WHRNQ9P202 907 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 ZNF69Q9UC07 566 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 GRID1Q9ULK0 1009 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 NAALADL1Q9UQQ1 740 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 PCDHB9Q9Y5E1 797 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 NFASCO94856 1347 aa6.71□□□□□ -1.33
CHD6-202ENST00000373222 MKI67P46013 3256 aaKnown RBP6.71□□□□□ -1.34
CHD6-202ENST00000373222 A0A0G2JMZ2 1700 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 LRRC37A2A6NM11 1700 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 CITO14578 2027 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 LRRD1A4D1F6 860 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 A8MUI8 341 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 ALG1L2C9J202 215 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 POC1B-GALNT4F8VUJ3 575 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 KATNA1O75449 491 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 UBOX5O94941 541 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 KRT1P04264 644 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 FGFR1P11362 822 aa6.71□□□□□ -1.34
CHD6-202ENST00000373222 BRAFP15056 766 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms