RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 CDK18Q07002 472 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 EPHA7Q15375 998 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 NTRK3Q16288 839 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 KLHL38Q2WGJ6 581 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 MIIPQ5JXC2 388 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 HP1BP3Q5SSJ5 553 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-203ENST00000372917 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 PXDC1Q5TGL8 231 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CTRB2Q6GPI1 263 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 AHI1Q8N157 1196 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 FANCBQ8NB91 859 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 DCUN1D1Q96GG9 259 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 GREM2Q9H772 168 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 GPAMQ9HCL2 828 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ERVK-5Q9HDB9 667 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 MAGEC1O60732 1142 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ABCB4P21439 1286 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CCNCP24863 283 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 PRKCEQ02156 737 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CETN1Q12798 172 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-203ENST00000372917 C6orf52Q5T4I8 152 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ANKRD40Q6AI12 368 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF486Q96H40 463 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-203ENST00000372917 DNAJA2O60884 412 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 SULT1C4O75897 302 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CRTAMO95727 393 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 BMXP51813 675 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 PTENP60484 403 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 XIAPP98170 497 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 SELENBP1Q13228 472 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ASTE1Q2TB18 679 aaPredicted RBP11.1□□□□□ -0.63
TRERF1-203ENST00000372917 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 CCDC105Q8IYK2 499 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 C12orf43Q96C57 262 aaKnown RBP11.1□□□□□ -0.63
TRERF1-203ENST00000372917 KLC2Q9H0B6 622 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 SP140LQ9H930 580 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 VPS37BQ9H9H4 285 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 KCNN3Q9UGI6 736 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 AMFRQ9UKV5 643 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 ERGIC3Q9Y282 383 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
TRERF1-203ENST00000372917 RTL9Q8NET4 1388 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ENPP3O14638 875 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 TM7SF2O76062 418 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 KRT6AP02538 564 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 KRT6BP04259 564 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CASP7P55210 303 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 COPZ1P61923 177 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 MAPK7Q13164 816 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CPSF7Q8N684 471 aaKnown RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 SLC15A4Q8N697 577 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 POLHQ9Y253 713 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 MEI4A8MW99 385 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 INO80B-WBP1J3KQ70 363 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 FCHO1O14526 889 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ALOX15BO15296 676 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CAMTA2O94983 1202 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CACNB3P54284 484 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 PTGDRQ13258 359 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 TCIRG1Q13488 830 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 HIC1Q14526 733 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 NFE2Q16621 373 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 INSCQ1MX18 579 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 EFHC1Q5JVL4 640 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 PRUNE1Q86TP1 453 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CCDC28AQ8IWP9 274 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF444Q8N0Y2 327 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 HERVK_113Q902F9 699 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 P2RX5Q93086 422 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ASIC4Q96FT7 647 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 MAP6Q96JE9 813 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 GRHL1Q9NZI5 618 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 POTECB2RU33 542 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 MAPK10P53779 464 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 B2MP61769 119 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 TMEM120AQ9BXJ8 343 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 ZNF696Q9H7X3 374 aa11.09□□□□□ -0.63
TRERF1-203ENST00000372917 PPARGC1AQ9UBK2 798 aaKnown RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
TRERF1-203ENST00000372917 A0A1W2PPW3 197 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 ANKRD62A6NC57 917 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 NOL3O60936 208 aaKnown RBP11.08□□□□□ -0.64
TRERF1-203ENST00000372917 PLEKHA8P1O95397 391 aa11.08□□□□□ -0.64
TRERF1-203ENST00000372917 TTLL1O95922 423 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms