RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PRUNE1Q86TP1 453 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 EMC1Q8N766 993 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 DNAJC16Q9Y2G8 782 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC16A1P53985 500 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 BMPR2Q13873 1038 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 NAPEPLDQ6IQ20 393 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PLEKHA8Q96JA3 519 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 E9PBE3 544 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 KLHL41O60662 606 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 GMPSP49915 693 aaPredicted RBP24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 TROAPQ12815 778 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 FAM151AQ8WW52 585 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 TUBGCP3Q96CW5 907 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 PTPRHQ9HD43 1115 aa24.8■■□□□ 1.56
RAPGEF1-203ENST00000372195 MAGEB2O15479 319 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 FNTAP49354 379 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 KATNAL1Q9BW62 490 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 GIMAP4Q9NUV9 329 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 HACL1Q9UJ83 578 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 GLI1P08151 1106 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 HARS2P49590 506 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 CLCN3P51790 818 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 AQP5P55064 265 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 SNAPC2Q13487 334 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 CYLC2Q14093 348 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRMT7Q9NVM4 692 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PCDHB8Q9UN66 801 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 FAM205AQ6ZU69 1335 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 P4HA2O15460 535 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 USP1O94782 785 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 TMED10P49755 219 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 ZNF157P51786 506 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PGS1Q32NB8 556 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 NOTUMQ6P988 496 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 HNRNPLLQ8WVV9 542 aaKnown RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PIK3R5Q8WYR1 880 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 DTNBP1Q96EV8 351 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 ILKAPQ9H0C8 392 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC44A2Q8IWA5 706 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRR23AA6NEV1 266 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PBLDP30039 288 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 SNX17Q15036 470 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 DGKDQ16760 1214 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 FAM172AQ8WUF8 416 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 USP13Q92995 863 aaPredicted RBP24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 SCN3BQ9NY72 215 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 CRLS1Q9UJA2 301 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 PLAGL2Q9UPG8 496 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 AK9Q5TCS8 1911 aa24.79■■□□□ 1.56
RAPGEF1-203ENST00000372195 ALBP02768 609 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 TFDP3Q5H9I0 405 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 PAFAH2Q99487 392 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 GTF3C4Q9UKN8 822 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 NFIBO00712 420 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC26A4O43511 780 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 PHF21AQ96BD5 680 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 ZSCAN5CA6NGD5 496 aaPredicted RBP24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 MEI4A8MW99 385 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 DDHD2O94830 711 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 RGS4P49798 205 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 TAF6P49848 677 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 MAP3K7CLP57077 242 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 FAM83EQ2M2I3 478 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 TRAF7Q6Q0C0 670 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 PPCSQ9HAB8 311 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 SNX13Q9Y5W8 968 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRR23D1E9PI22 279 aaPredicted RBP24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 HBP1O60381 514 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 PRR23D2P0DMB1 279 aaPredicted RBP24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 ACO1P21399 889 aaKnown RBP24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 CCDC15Q0P6D6 951 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 ADGRA1Q86SQ6 560 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 AP1G2O75843 785 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 SREK1IP1Q8N9Q2 155 aaPredicted RBP24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 STKLD1Q8NE28 680 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 ANKZF1Q9H8Y5 726 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 ANKEF1Q9NU02 776 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 SLC38A7Q9NVC3 462 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 RIC8BQ9NVN3 520 aa24.78■■□□□ 1.56
RAPGEF1-203ENST00000372195 GPR75-ASB3A0A0A6YYF3 556 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 RRM1P23921 792 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 KCTD17Q8N5Z5 321 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 TTI2Q6NXR4 508 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 BBS2Q9BXC9 721 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 CARD9Q9H257 536 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 NMRK2Q9NPI5 230 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 HEATR9A2RTY3 570 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 TRPC5OSA6NMA1 111 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 EFCAB14O75071 495 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 KRT75O95678 551 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 MT-CO1P00395 513 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 ALDH6A1Q02252 535 aaKnown RBP24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 FOXP3Q9BZS1 431 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 PCDHB7Q9Y5E2 793 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 ZNF23P17027 643 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 NPTX2P47972 431 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 MRPS35P82673 323 aaKnown RBP24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 WLSQ5T9L3 541 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 SCUBE1Q8IWY4 988 aa24.77■■□□□ 1.56
RAPGEF1-203ENST00000372195 DAGLBQ8NCG7 672 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms