RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 DTX3LQ8TDB6 740 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 ISCUQ9H1K1 167 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 GID8Q9NWU2 228 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 KIF17Q9P2E2 1029 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 TRIM10Q9UDY6 481 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 PCDHB12Q9Y5F1 795 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 SUPT3HO75486 399 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 GRAP2O75791 330 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 EGFRP00533 1210 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 RAG1P15918 1043 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 SERPINB10P48595 397 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 KDSRQ06136 332 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 GTF2H3Q13889 308 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 CAPRIN1Q14444 709 aaKnown RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 LONRF1Q17RB8 773 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 DCAF6Q58WW2 860 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 CYP4A22Q5TCH4 519 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 ZBTB10Q96DT7 871 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 MYPNQ86TC9 1320 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 CCDC189A1A4V9 331 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 ANP32DO95626 131 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 KBTBD12Q3ZCT8 623 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 EML4Q9HC35 981 aaKnown RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 FAM198AQ9UFP1 575 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 AP3B1O00203 1094 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 KCNN4O15554 427 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 RAD51CO43502 376 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 THP07101 528 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 NCAM1P13591 858 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 LAMTOR4Q0VGL1 99 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 TRAPPC11Q7Z392 1133 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 MCRS1Q96EZ8 462 aa13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
RAPGEF1-201ENST00000372189 TMEM247A6NEH6 219 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ASMTLO95671 621 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 AMHR2Q16671 573 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 RAB42Q8N4Z0 105 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 KCNB2Q92953 911 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 TRIM54Q9BYV2 358 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 NRDE2Q9H7Z3 1164 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 PSMC3IPQ9P2W1 217 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 A0A087WZ62 844 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 CYB561D2O14569 222 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 SLC9A1P19634 815 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 GPD1P21695 349 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ANGPTL8Q6UXH0 198 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 SH3BP5LQ7L8J4 393 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 OR9Q1Q8NGQ5 310 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 INSRRP14616 1297 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ARHGAP22Q7Z5H3 698 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 B4GALNT2Q8NHY0 566 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 NAF1Q96HR8 494 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 OSMRQ99650 979 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 EGFL8Q99944 293 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 MTO1Q9Y2Z2 717 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 C3orf70A6NLC5 250 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 PRR23D1E9PI22 279 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 PRR23D2P0DMB1 279 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 CUL2Q13617 745 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 INPP5AQ14642 412 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 CYTH1Q15438 398 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 NAB2Q15742 525 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 RGMBQ6NW40 437 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ANKMY2Q8IV38 441 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 TCAIMQ8N3R3 496 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 ERP27Q96DN0 273 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 L2HGDHQ9H9P8 463 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 AGPAT5Q9NUQ2 364 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 PKD2L2Q9NZM6 624 aa13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 AFF4Q9UHB7 1163 aaKnown RBP13.83□□□□□ -0.2
RAPGEF1-201ENST00000372189 IFNA8P32881 189 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 RAB27AP51159 221 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 GRSF1Q12849 480 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 KDM7AQ6ZMT4 941 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 DNAJB3Q8WWF6 145 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 SNX19Q92543 992 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ULK4Q96C45 1275 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ZFYVE19Q96K21 471 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 ALG13Q9NP73 1137 aaKnown RBP13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 H0Y626 953 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 IQSEC1Q6DN90 963 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 CATSPERGQ6ZRH7 1159 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 CHSY1Q86X52 802 aa13.82□□□□□ -0.2
RAPGEF1-201ENST00000372189 OR2W6PQ8NHA6 318 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms