RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 IGBP1P78318 339 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 CDC42EP1Q00587 391 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 DHX9Q08211 1270 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 LPIN1Q14693 890 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 SLMAPQ14BN4 828 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 UAP1Q16222 522 aaPredicted RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 AMHR2Q16671 573 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 SGO2Q562F6 1265 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 CEP85LQ5SZL2 805 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 AADACL2Q6P093 401 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 TTC27Q6P3X3 843 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 MMS22LQ6ZRQ5 1243 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 PASD1Q8IV76 773 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 UBLCP1Q8WVY7 318 aaPredicted RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 ARL8AQ96BM9 186 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 PABPC5Q96DU9 382 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 LHX5Q9H2C1 402 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 C11orf16Q9NQ32 467 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 AKT3Q9Y243 479 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 NFS1Q9Y697 457 aa14.85□□□□□ -0.03
LDB3-204ENST00000372066 PDCD11Q14690 1871 aaKnown RBP14.85□□□□□ -0.03
LDB3-204ENST00000372066 FAM170AA1A519 330 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 B4GALT5O43286 388 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 GAS8O95995 478 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 CALCAP01258 141 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 RB1P06400 928 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 NUDT17P0C025 328 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 COPS2P61201 443 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 CAV1Q03135 178 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 MGAT3Q09327 533 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
LDB3-204ENST00000372066 PCBP1Q15365 356 aaKnown RBP eCLIP14.84□□□□□ -0.03
LDB3-204ENST00000372066 DNAJC24Q6P3W2 148 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 MTHFD1LQ6UB35 978 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 HOOK3Q86VS8 718 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 NIPA2Q8N8Q9 360 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 ADPGKQ9BRR6 497 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 PDZD7Q9H5P4 517 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 CLDND1Q9NY35 253 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 GRHL1Q9NZI5 618 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 WHRNQ9P202 907 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 WDR35Q9P2L0 1181 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 ARIH1Q9Y4X5 557 aaPredicted RBP14.84□□□□□ -0.03
LDB3-204ENST00000372066 CDY2AQ9Y6F7 541 aa14.84□□□□□ -0.03
LDB3-204ENST00000372066 COL4A4P53420 1690 aaPredicted RBP14.84□□□□□ -0.03
LDB3-204ENST00000372066 A0A087WZ62 844 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 TCRBV5S1A1TA0A578 114 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 MBLAC1A4D2B0 266 aaPredicted RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 TMEM191CA6NGB0 347 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 RRN3P2A6NIE6 340 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 SRRM3A6NNA2 597 aaPredicted RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 STAG3L1P0CL83 205 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 CXCL8P10145 99 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 CALCOCO2Q13137 446 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 DCAF4L1Q3SXM0 396 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 FBXO47Q5MNV8 452 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 MARCH8Q5T0T0 291 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 ZDHHC24Q6UX98 284 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 ZDHHC14Q8IZN3 488 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 C3orf20Q8ND61 904 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 FDXACB1Q9BRP7 624 aaPredicted RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 C11orf84Q9BUA3 381 aaPredicted RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 TRIM31Q9BZY9 425 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 FAM49AQ9H0Q0 323 aaPredicted RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 MINDY3Q9H8M7 445 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 DDX56Q9NY93 547 aaKnown RBP14.83□□□□□ -0.04
LDB3-204ENST00000372066 FAM50BQ9Y247 325 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 RWDD3Q9Y3V2 267 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 C2CD2Q9Y426 696 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 BRWD1Q9NSI6 2320 aa14.83□□□□□ -0.04
LDB3-204ENST00000372066 C5orf67F2Z3F1 127 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 GRM6O15303 877 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 CD58P19256 250 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 NR1D1P20393 614 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 BRD2P25440 801 aaKnown RBP14.82□□□□□ -0.04
LDB3-204ENST00000372066 PTPN7P35236 360 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 MRPS6P82932 125 aaKnown RBP14.82□□□□□ -0.04
LDB3-204ENST00000372066 LMNB2Q03252 620 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 ZNF844Q08AG5 666 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 PTK6Q13882 451 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 BTG3Q14201 252 aaPredicted RBP14.82□□□□□ -0.04
LDB3-204ENST00000372066 PPP1R7Q15435 360 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 CCNG2Q16589 344 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 ERICH1Q86X53 443 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 CPNE8Q86YQ8 564 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 RCOR2Q8IZ40 523 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 CEP120Q8N960 986 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 C1orf127Q8N9H9 656 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 BBOF1Q8ND07 529 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 ART4Q93070 314 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 ZBTB10Q96DT7 871 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 DCLK3Q9C098 648 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 PABPC3Q9H361 631 aaKnown RBP14.82□□□□□ -0.04
LDB3-204ENST00000372066 ITGA11Q9UKX5 1188 aa14.82□□□□□ -0.04
LDB3-204ENST00000372066 SNX24Q9Y343 169 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms