RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 APOC4-APOC2K7ER74 178 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 SNAI1O95863 264 aaPredicted RBP30.32■■■□□ 2.44
SSBP3-204ENST00000371320 APOC2P02655 101 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 GPD1P21695 349 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 MARCH8Q5T0T0 291 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 OR6B2Q6IFH4 312 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 CNPY3Q9BT09 278 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 MIS12Q9H081 205 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 PIK3R2O00459 728 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 STRNO43815 780 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 RPL22P35268 128 aaKnown RBP30.32■■■□□ 2.44
SSBP3-204ENST00000371320 EIF3EP60228 445 aaKnown RBP30.32■■■□□ 2.44
SSBP3-204ENST00000371320 NUGGCQ68CJ6 796 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 ZNF467Q7Z7K2 595 aaPredicted RBP30.32■■■□□ 2.44
SSBP3-204ENST00000371320 CPT1BQ92523 772 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 SYT17Q9BSW7 474 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 RSAD1Q9HA92 442 aa30.32■■■□□ 2.44
SSBP3-204ENST00000371320 PDGFRAP16234 1089 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 GRM5P41594 1212 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 TRABD2AQ86V40 505 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 ANKMY2Q8IV38 441 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 UNC45BQ8IWX7 931 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 RXFP2Q8WXD0 754 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 E5RJQ4 531 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 HNRNPH1P31943 449 aaKnown RBP30.31■■■□□ 2.44
SSBP3-204ENST00000371320 ARL4CP56559 192 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 SH3PXD2AQ5TCZ1 1133 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 ANKRD22Q5VYY1 191 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 FAM183BPQ6ZVS7 135 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 ZNF410Q86VK4 478 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 PEBP4Q96S96 227 aa30.31■■■□□ 2.44
SSBP3-204ENST00000371320 MAK16Q9BXY0 300 aaKnown RBP30.31■■■□□ 2.44
SSBP3-204ENST00000371320 FAM47DPA6NHR8 397 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 C2CD4BA6NLJ0 364 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 MCF2LO15068 1137 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 C12orf29Q8N999 325 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 NAT8LQ8N9F0 302 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 TGS1Q96RS0 853 aaKnown RBP30.3■■■□□ 2.44
SSBP3-204ENST00000371320 UBN1Q9NPG3 1134 aa30.3■■■□□ 2.44
SSBP3-204ENST00000371320 USP15Q9Y4E8 981 aaPredicted RBP30.3■■■□□ 2.44
SSBP3-204ENST00000371320 BANF1O75531 89 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 OAS1P00973 400 aaKnown RBP30.29■■■□□ 2.44
SSBP3-204ENST00000371320 YBX3P16989 372 aaKnown RBP eCLIP30.29■■■□□ 2.44
SSBP3-204ENST00000371320 DCAF4L1Q3SXM0 396 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 FAM71DQ8N9W8 422 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 MAGEB18Q96M61 343 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 PPCSQ9HAB8 311 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 STAU2Q9NUL3 570 aaKnown RBP eCLIP30.29■■■□□ 2.44
SSBP3-204ENST00000371320 PLXNA1Q9UIW2 1896 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 SMPD1P17405 629 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 CDH6P55285 790 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 GAD2Q05329 585 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 STILQ15468 1287 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 GOLGA7BQ2TAP0 167 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 TRPM8Q7Z2W7 1104 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 DPP9Q86TI2 863 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 SPATA18Q8TC71 538 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 SGSM3Q96HU1 749 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 PHACTR1Q9C0D0 580 aa30.29■■■□□ 2.44
SSBP3-204ENST00000371320 NPTXRO95502 500 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 PFKMP08237 780 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 MMP3P08254 477 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 RBP3P10745 1247 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 KRT15P19012 456 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 MKRN3Q13064 507 aaKnown RBP30.28■■■□□ 2.44
SSBP3-204ENST00000371320 MMRN1Q13201 1228 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 KIZQ2M2Z5 673 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 C15orf59Q2T9L4 293 aaPredicted RBP30.28■■■□□ 2.44
SSBP3-204ENST00000371320 TRNP1Q6NT89 227 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 TAB3Q8N5C8 712 aaPredicted RBP30.28■■■□□ 2.44
SSBP3-204ENST00000371320 PYROXD1Q8WU10 500 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 SLC24A2Q9UI40 661 aa30.28■■■□□ 2.44
SSBP3-204ENST00000371320 BTBD19C9JJ37 291 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 GRAP2O75791 330 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 FNBP1LQ5T0N5 605 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 PIWIL1Q96J94 861 aaKnown RBP30.27■■■□□ 2.44
SSBP3-204ENST00000371320 TRABDQ9H4I3 376 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 PRPSAP2O60256 369 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 RGS7P49802 495 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 GPX6P59796 221 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 IL9RQ01113 521 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 PKN2Q16513 984 aaKnown RBP30.27■■■□□ 2.44
SSBP3-204ENST00000371320 CDO1Q16878 200 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 DUSP28Q4G0W2 176 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 OR6J1Q8NGC5 347 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 GBA2Q9HCG7 927 aaPredicted RBP30.27■■■□□ 2.44
SSBP3-204ENST00000371320 SLC40A1Q9NP59 571 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 GINS2Q9Y248 185 aa30.27■■■□□ 2.44
SSBP3-204ENST00000371320 PLXNB2O15031 1838 aa30.26■■■□□ 2.44
SSBP3-204ENST00000371320 SPAG7O75391 227 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 SUN1O94901 812 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 ENDOD1O94919 500 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 PHBP35232 272 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 DGKDQ16760 1214 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 MSS51Q4VC12 460 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 RAB6CQ53S08 254 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 CYP4V2Q6ZWL3 525 aaPredicted RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 MRRFQ96E11 262 aaKnown RBP30.26■■■□□ 2.43
SSBP3-204ENST00000371320 RAB6CQ9H0N0 254 aa30.26■■■□□ 2.43
SSBP3-204ENST00000371320 ZNF408Q9H9D4 720 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms