RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 CCNG2Q16589 344 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 GALNT15Q8N3T1 639 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 CAPSLQ8WWF8 208 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 CELF1Q92879 486 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 ASPSCR1Q9BZE9 553 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 CACYBPQ9HB71 228 aaKnown RBP13.17□□□□□ -0.3
GPC4-201ENST00000370828 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 PI4KBQ9UBF8 816 aa13.17□□□□□ -0.3
GPC4-201ENST00000370828 FAM237BA0A1B0GVD1 139 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 WFS1O76024 890 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 AKR1D1P51857 326 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 ZNF662Q6ZS27 426 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 BNIPLQ7Z465 357 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 CCNJLQ8IV13 435 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 ZSCAN18Q8TBC5 510 aaPredicted RBP13.16□□□□□ -0.3
GPC4-201ENST00000370828 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 RUSC1Q9BVN2 902 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 DCLK3Q9C098 648 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 SEMA6AQ9H2E6 1030 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 AKT3Q9Y243 479 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 AXIN1O15169 862 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 GRAP2O75791 330 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 PPP4R4Q6NUP7 873 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 KDELC2Q7Z4H8 507 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 SLC39A10Q9ULF5 831 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 MYO1GB0I1T2 1018 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 EPHA7Q15375 998 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 LIN52Q52LA3 116 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 IL31Q6EBC2 164 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 EFCAB3Q8N7B9 438 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 KYQ8NBH2 561 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
GPC4-201ENST00000370828 DNAJC18Q9H819 358 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 HACD3Q9P035 362 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
GPC4-201ENST00000370828 GLRA3O75311 464 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 NPTXRO95502 500 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 RALBP11234 206 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 NFKBIAP25963 317 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 SKIV2L2P42285 1042 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 PRUNE1Q86TP1 453 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 RIN3Q8TB24 985 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ARHGEF1Q92888 912 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 SLC39A3Q9BRY0 314 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 DNAAF2Q9NVR5 837 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 TSR3Q9UJK0 312 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 ASNA1O43681 348 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 CCDC130P13994 396 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ALDH1A3P47895 512 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 DEPDC1Q5TB30 811 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 DHDDSQ86SQ9 333 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 FBXO6Q9NRD1 293 aaPredicted RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 SCN3BQ9NY72 215 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 RPA1P27694 616 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 MIIPQ5JXC2 388 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 FRA10AC1Q70Z53 315 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 CDRT15Q96T59 188 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ZFYVE16Q7Z3T8 1539 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 RGS5O15539 181 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 DCXO43602 365 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 CYP11B1P15538 503 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 LBRQ14739 615 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 IMPG1Q17R60 797 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 PERM1Q5SV97 790 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 SCFD2Q8WU76 684 aa13.15□□□□□ -0.3
GPC4-201ENST00000370828 DGCR14Q96DF8 476 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 SRPK1Q96SB4 655 aaKnown RBP13.15□□□□□ -0.3
GPC4-201ENST00000370828 LYNP07948 512 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 CCDC166P0CW27 439 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 FGFR3P22607 806 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 JAK3P52333 1124 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 DUPD1Q68J44 220 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 NET1Q7Z628 596 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 SLC47A2Q86VL8 602 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 ZNF669Q96BR6 464 aaPredicted RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 SARS2Q9NP81 518 aaKnown RBP13.14□□□□□ -0.31
GPC4-201ENST00000370828 WDR70Q9NW82 654 aa13.14□□□□□ -0.31
GPC4-201ENST00000370828 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms