RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 NBPF20Q3BBV1 942 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 PABPC1LQ4VXU2 614 aaKnown RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 ULK2Q8IYT8 1036 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 KCNK4Q9NYG8 393 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 SIRPGQ9P1W8 387 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 CNTNAP1P78357 1384 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 RLFQ13129 1914 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 A0A0B4J269 797 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 MAP3K7O43318 606 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 PHBP35232 272 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 CAP2P40123 477 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 CPA2P48052 419 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 TUBB3Q13509 450 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 PRPF39Q86UA1 669 aaKnown RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 CHURC1Q8WUH1 139 aa18.35■□□□□ 0.53
CHUK-201ENST00000370397 ZNF395Q9H8N7 513 aaPredicted RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
CHUK-201ENST00000370397 SNNO75324 88 aaPredicted RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 PYGBP11216 843 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 STIP1P31948 543 aaKnown RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 RTP1P59025 263 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 KBTBD12Q3ZCT8 623 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 BPTFQ12830 3046 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 COL11A1P12107 1806 aaPredicted RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 ATG7O95352 703 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 UBTFL6P0CB48 400 aaPredicted RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 GRM2Q14416 872 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 PGM5Q15124 567 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 MCUR1Q96AQ8 359 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 CCDC28BQ9BUN5 200 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 PNPLA8Q9NP80 782 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 A0A088AWK7 358 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 GSRP00390 522 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 GSTT1P30711 240 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 CDK18Q07002 472 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 PTK7Q13308 1070 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 TMCO4Q5TGY1 634 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 KYAT3Q6YP21 454 aaKnown RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 BBS12Q6ZW61 710 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 RAPH1Q70E73 1250 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 ADGRG6Q86SQ4 1221 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
CHUK-201ENST00000370397 MECRQ9BV79 373 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 C1orf21Q9H246 121 aa18.34■□□□□ 0.53
CHUK-201ENST00000370397 ADGRA2Q96PE1 1338 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 KAT6AQ92794 2004 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 NDC80O14777 642 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 CD48P09326 243 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 SPATA31D3P0C874 917 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 CCNFP41002 786 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 MSLNQ13421 630 aaPredicted RBP18.33■□□□□ 0.53
CHUK-201ENST00000370397 KCNJ11Q14654 390 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 IZUMO2Q6UXV1 221 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 SPATA31D4Q6ZUB0 917 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 USP37Q86T82 979 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 VPS52Q8N1B4 723 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 UBE2OQ9C0C9 1292 aaKnown RBP18.33■□□□□ 0.53
CHUK-201ENST00000370397 DMAP1Q9NPF5 467 aaPredicted RBP18.33■□□□□ 0.53
CHUK-201ENST00000370397 TTLL3Q9Y4R7 772 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 PCDHB4Q9Y5E5 795 aa18.33■□□□□ 0.53
CHUK-201ENST00000370397 HMX2A2RU54 273 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 H3BRJ5 948 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 PDLIM1O00151 329 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 ATP2A1O14983 1001 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 IFNB1P01574 187 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 RFX8Q6ZV50 586 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 GPAMQ9HCL2 828 aa18.33■□□□□ 0.52
CHUK-201ENST00000370397 B2RBV5 119 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 CDK7P50613 346 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 FAM160B2Q86V87 743 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 CDAN1Q8IWY9 1227 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 PDCD7Q8N8D1 485 aaKnown RBP18.32■□□□□ 0.52
CHUK-201ENST00000370397 OR5B17Q8NGF7 314 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 DDX56Q9NY93 547 aaKnown RBP18.32■□□□□ 0.52
CHUK-201ENST00000370397 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 LRCH4O75427 683 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 RFPL1O75677 317 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 USP1O94782 785 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 ELK3P41970 407 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 SSR1P43307 286 aaKnown RBP18.32■□□□□ 0.52
CHUK-201ENST00000370397 POLE2P56282 527 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 DSG1Q02413 1049 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 TRMT5Q32P41 509 aaKnown RBP18.32■□□□□ 0.52
CHUK-201ENST00000370397 SCUBE1Q8IWY4 988 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 SRPK1Q96SB4 655 aaKnown RBP18.32■□□□□ 0.52
CHUK-201ENST00000370397 TRIM4Q9C037 500 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHUK-201ENST00000370397 MKS1Q9NXB0 559 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHUK-201ENST00000370397 BTKQ06187 659 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 ATG14Q6ZNE5 492 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 CHMP2BQ9UQN3 213 aa18.32■□□□□ 0.52
CHUK-201ENST00000370397 PLLPQ9Y342 182 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms