RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 AGPAT3Q9NRZ7 376 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 TBKBP1A7MCY6 615 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 PCNAP12004 261 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 TERF2Q15554 542 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
PDCD11-201ENST00000369797 ZNF677Q86XU0 584 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 USP13Q92995 863 aaPredicted RBP11.7□□□□□ -0.54
PDCD11-201ENST00000369797 KCNK16Q96T55 309 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 TMEM245Q9H330 911 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 IGFLR1Q9H665 355 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 RPS6KL1Q9Y6S9 549 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 POMCP01189 267 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 TMEM253P0C7T8 217 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 S100A5P33763 92 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
PDCD11-201ENST00000369797 KIRREL3Q8IZU9 778 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 OSMRQ99650 979 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 RBBP8Q99708 897 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
PDCD11-201ENST00000369797 TIMM13Q9Y5L4 95 aaPredicted RBP11.7□□□□□ -0.54
PDCD11-201ENST00000369797 CSF1RP07333 972 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 FGFR1P11362 822 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 GUCA1AP43080 201 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RUNX1T1Q06455 604 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 BOLA3Q53S33 107 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RIN2Q8WYP3 895 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 E2F7Q96AV8 911 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 OPTNQ96CV9 577 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 TUBGCP3Q96CW5 907 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 VPS9D1Q9Y2B5 631 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ABCA8O94911 1581 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 DYRK3O43781 588 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 TPST1O60507 370 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CYP2C8P10632 490 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 MDH1P40925 334 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RPS7P62081 194 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 DNAL1Q4LDG9 190 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 MPZL3Q6UWV2 235 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CBWD2Q8IUF1 395 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ERP27Q96DN0 273 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 MAGED4Q96JG8 741 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 EIF3LQ9Y262 564 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 TRIM49D1C9J1S8 452 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 SGPL1O95470 568 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ARP10275 920 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RAG1P15918 1043 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 BACE1P56817 501 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ANTXR2P58335 489 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 DENND1BQ6P3S1 775 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CCDC3Q9BQI4 270 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 APPL1Q9UKG1 709 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 B2RBV5 119 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 KLHL2O95198 593 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 GLRBP48167 497 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 PGS1Q32NB8 556 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 TSGA10IPQ3SY00 556 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 ZNF438Q7Z4V0 828 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 OLFM3Q96PB7 478 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 THAP2Q9H0W7 228 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 SPAG6O75602 509 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CYP7B1O75881 506 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 SNRPFP62306 86 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 STARD3Q14849 445 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 EFL1Q7Z2Z2 1120 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RDM1Q8NG50 284 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RERGLQ9H628 205 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 RUVBL2Q9Y230 463 aaKnown RBP11.69□□□□□ -0.54
PDCD11-201ENST00000369797 SHROOM2Q13796 1616 aa11.69□□□□□ -0.54
PDCD11-201ENST00000369797 KDM6BO15054 1643 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 TARBP1Q13395 1621 aaKnown RBP11.68□□□□□ -0.54
PDCD11-201ENST00000369797 ALDH2P05091 517 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 GRK3P35626 688 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.548e-7■■■■■ 26.8
PDCD11-201ENST00000369797 CMTM5Q96DZ9 223 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CNDP1Q96KN2 507 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 POP1Q99575 1024 aaKnown RBP11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CLPBQ9H078 707 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CYP4F12Q9HCS2 524 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 SETD4Q9NVD3 440 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CDY2AQ9Y6F7 541 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CDY1Q9Y6F8 540 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 ARHGEF40Q8TER5 1519 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 TMEM120BA0PK00 339 aa11.68□□□□□ -0.54
PDCD11-201ENST00000369797 CPSF4O95639 269 aaKnown RBP11.68□□□□□ -0.54
PDCD11-201ENST00000369797 KLRC2P26717 231 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms