RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 STK17AQ9UEE5 414 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 CROTQ9UKG9 612 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 PCDHB2Q9Y5E7 798 aa7.27□□□□□ -1.25
CSDE1-204ENST00000369530 HIDE1A8MVS5 230 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 EIF3DO15371 548 aaKnown RBP eCLIP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 HSF2BPO75031 334 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NQO1P15559 274 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NPR3P17342 541 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF76P36508 570 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 CCT8P50990 548 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 MXRA7P84157 204 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GAB4Q2WGN9 574 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 PUS10Q3MIT2 529 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SH2D4BQ5SQS7 431 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 AGBL2Q5U5Z8 902 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 WDR78Q5VTH9 848 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 OTUD6AQ7L8S5 288 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SYCP3Q8IZU3 236 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TRPC4APQ8TEL6 797 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 EEF2KMTQ96G04 330 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 PCMTD1Q96MG8 357 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 MMS19Q96T76 1030 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 OCEL1Q9H607 264 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 HESX1Q9UBX0 185 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 STK39Q9UEW8 545 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 CNTN6Q9UQ52 1028 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 COMMD3-BMI1R4GMX3 469 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SIGLEC16A6NMB1 481 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ANKRD63C9JTQ0 380 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SPTLC1O15269 473 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 OAS1P00973 400 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 MARK3P27448 753 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ACADVLP49748 655 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NLRP11P59045 1033 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 BPIFB4P59827 614 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ENOX2Q16206 610 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SLC27A1Q6PCB7 646 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 CYP26C1Q6V0L0 522 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ZDHHC14Q8IZN3 488 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 CCDC63Q8NA47 563 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ENOX1Q8TC92 643 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 CLSTN3Q9BQT9 956 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TRIM9Q9C026 710 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NACA2Q9H009 215 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 PLEKHA5Q9HAU0 1116 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GDF3Q9NR23 364 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TYW1Q9NV66 732 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SH3GLB1Q9Y371 365 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NFE2L3Q9Y4A8 694 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NPHP3-ACAD11A0A0J9YXS1 232 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GOLGA6L10A0A0M3HER8 536 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 SORBS3O60504 671 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 MCF2P10911 925 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 PLCG1P19174 1290 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 MLLT6P55198 1093 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GUCY1A3Q02108 690 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ADCY1Q08828 1119 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 KCNA1Q09470 495 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 BIRC3Q13489 604 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 PADI6Q6TGC4 694 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ANKRD13BQ86YJ7 626 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TMTC1Q8IUR5 882 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 LMNTD2Q8IXW0 634 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GDPD5Q8WTR4 605 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM143Q96AN5 459 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF653Q96CK0 615 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NXF3Q9H4D5 531 aaKnown RBP7.26□□□□□ -1.25
CSDE1-204ENST00000369530 EPB41L1Q9H4G0 881 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 NRBP2Q9NSY0 501 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 FBXW11Q9UKB1 542 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 TRAF3IP3Q9Y228 551 aa7.26□□□□□ -1.25
CSDE1-204ENST00000369530 GPR37L1O60883 481 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MFAP3LO75121 409 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 HIP1RO75146 1068 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 BCAR1P56945 870 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SNRPFP62306 86 aaKnown RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 QPCTQ16769 361 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM266Q2M3C6 531 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SNX30Q5VWJ9 437 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MAFAQ8NHW3 353 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SCFD1Q8WVM8 642 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 KBTBD7Q8WVZ9 684 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 NAP1L3Q99457 506 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ADAM2Q99965 735 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 CUEDC2Q9H467 287 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 COG5Q9UP83 839 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ADAMTS20P59510 1910 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SOWAHDA6NJG2 315 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TIMM44O43615 452 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 KRT38O76015 456 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 KRT18P05783 430 aaKnown RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 FGFR4P22455 802 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SERPINB8P50452 374 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MTF1Q14872 753 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 KRT72Q14CN4 511 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 BRDTQ58F21 947 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms