RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 CATSPER2Q96P56 530 aa10.99□□□□□ -0.65
LYSMD1-201ENST00000368908 SIKE1Q9BRV8 207 aa10.99□□□□□ -0.65
LYSMD1-201ENST00000368908 WDR83Q9BRX9 315 aaKnown RBP10.99□□□□□ -0.65
LYSMD1-201ENST00000368908 C12orf65Q9H3J6 166 aaKnown RBP10.99□□□□□ -0.65
LYSMD1-201ENST00000368908 SOX13Q9UN79 622 aa10.99□□□□□ -0.65
LYSMD1-201ENST00000368908 A0A088AWK7 358 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 A6NJR5 290 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 GOLGA8RI6L899 631 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 BANF1O75531 89 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 SMIM18P0DKX4 95 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 CPOXP36551 454 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PTK7Q13308 1070 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 HIC1Q14526 733 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 HSF5Q4G112 596 aaPredicted RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 SFT2D3Q587I9 215 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 UGT2A3Q6UWM9 527 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 RFX8Q6ZV50 586 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 FBXO36Q8NEA4 188 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 FEZF2Q8TBJ5 459 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 CPT1BQ92523 772 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 SERAC1Q96JX3 654 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 FBXL18Q96ME1 805 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PRICKLE1Q96MT3 831 aaPredicted RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 RIT2Q99578 217 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 SENP7Q9BQF6 1050 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 ALG13Q9NP73 1137 aaKnown RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 TIMMDC1Q9NPL8 285 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 C1orf112Q9NSG2 853 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 DDX56Q9NY93 547 aaKnown RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 ZNF510Q9Y2H8 683 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 C2orf71A6NGG8 1288 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 E5RJQ4 531 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 SGK1O00141 431 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 KRT10P13645 584 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 VCLP18206 1134 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 GJC1P36383 396 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 CCNFP41002 786 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 RPL5P46777 297 aaKnown RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 INHBCP55103 352 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 BTKQ06187 659 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PDK3Q15120 406 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 FNBP1LQ5T0N5 605 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PRPF39Q86UA1 669 aaKnown RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 RHPN2Q8IUC4 686 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PALM2Q8IXS6 379 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 CLPTM1LQ96KA5 538 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 KLF6Q99612 283 aaPredicted RBP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 PARVAQ9NVD7 372 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 EFR3BQ9Y2G0 817 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 ADAMTSL1Q8N6G6 1762 aa10.98□□□□□ -0.65
LYSMD1-201ENST00000368908 GOLGA8IPA6NC78 632 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 GOLGA8JA6NMD2 632 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 TLR3O15455 904 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 ATF7P17544 494 aaPredicted RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 WASHC5Q12768 1159 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 DBN1Q16643 649 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 TEX44Q53QW1 395 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 TFDP3Q5H9I0 405 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 KAZNQ674X7 775 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 LLGL2Q6P1M3 1020 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 SATL1Q86VE3 508 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 LRRC43Q8N309 656 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 MARVELD2Q8N4S9 558 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 GFM2Q969S9 779 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 C11orf70Q9BRQ4 267 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 ZNF577Q9BSK1 485 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 STN1Q9H668 368 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 PNPLA8Q9NP80 782 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 SIRPGQ9P1W8 387 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 USTQ9Y2C2 406 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 IKBKGQ9Y6K9 419 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 PI4K2BG5E9Z4 385 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 COPEO14579 308 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 HNRNPRO43390 633 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 LYPLA2O95372 231 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 SNAP25P60880 206 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 ZNF200P98182 395 aaPredicted RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 CYP24A1Q07973 514 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 HSP90AA5PQ58FG0 334 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 ANKRD22Q5VYY1 191 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 SLC30A10Q6XR72 485 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 SV2AQ7L0J3 742 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 MAP4K3Q8IVH8 894 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 PDIK1LQ8N165 341 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 G3BP2Q9UN86 482 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-201ENST00000368908 C15orf38-AP3S2A0A0A6YYH1 394 aa10.96□□□□□ -0.65
LYSMD1-201ENST00000368908 VILLO15195 856 aa10.96□□□□□ -0.65
LYSMD1-201ENST00000368908 DENRO43583 198 aaKnown RBP10.96□□□□□ -0.65
LYSMD1-201ENST00000368908 P4HBP07237 508 aaKnown RBP10.96□□□□□ -0.65
LYSMD1-201ENST00000368908 INHBAP08476 426 aa10.96□□□□□ -0.65
LYSMD1-201ENST00000368908 CPA3P15088 417 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms