RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 MIF4GDA9UHW6 222 aaKnown RBP11.2□□□□□ -0.62
TPM3-212ENST00000368533 F8W810 466 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SHBGP04278 402 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 PYGMP11217 842 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 LMO2P25791 158 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 PMS2P54278 862 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
TPM3-212ENST00000368533 PPP2R5EQ16537 467 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 TBC1D25Q3MII6 688 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 ATP13A4Q4VNC1 1196 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 EIF1ADQ8N9N8 165 aaKnown RBP11.2□□□□□ -0.62
TPM3-212ENST00000368533 MCEEQ96PE7 176 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 ASB7Q9H672 318 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 MTRF1LQ9UGC7 380 aaKnown RBP11.2□□□□□ -0.62
TPM3-212ENST00000368533 PADI3Q9ULW8 664 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 NME7Q9Y5B8 376 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SCNN1GP51170 649 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 RBP5P82980 135 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 DCAF4L1Q3SXM0 396 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 TAX1BP1Q86VP1 789 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 Q9Y3F1 56 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 TRPV2Q9Y5S1 764 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 RPS6KL1Q9Y6S9 549 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SCN10AQ9Y5Y9 1956 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 PI4K2BG5E9Z4 385 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 TLR3O15455 904 aaKnown RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 RGS16O15492 202 aaPredicted RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 ADORA2BP29275 332 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 ABL2P42684 1182 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 VPS41P49754 854 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 AP3M2P53677 418 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 KCNJ2P63252 427 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 SLC29A2Q14542 456 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 TRIP13Q15645 432 aaPredicted RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 RNF180Q86T96 592 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 HOOK3Q86VS8 718 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 CCDC63Q8NA47 563 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 C1orf54Q8WWF1 131 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 CCT6BQ92526 530 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 PIWIL1Q96J94 861 aaKnown RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
TPM3-212ENST00000368533 FAM187AA6NFU0 413 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 TRAPPC3O43617 180 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 PHF2O75151 1096 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 GZMAP12544 262 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 GRK4P32298 578 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 RANBP1P43487 201 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 BPIFB4P59827 614 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 TAF2Q6P1X5 1199 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 SERINC5Q86VE9 423 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 PRELID2Q8N945 189 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 KCNN1Q92952 543 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 GLT1D1Q96MS3 346 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 SEMA4AQ9H3S1 761 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 EBF2Q9HAK2 575 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 GTF3C4Q9UKN8 822 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 STK38LQ9Y2H1 464 aa11.19□□□□□ -0.62
TPM3-212ENST00000368533 CCDC130P13994 396 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 HOXD10P28358 340 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CHRNA3P32297 505 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 RPL21P46778 160 aaKnown RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 CALCOCO2Q13137 446 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 DHX34Q14147 1143 aaKnown RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 PTPN20Q4JDL3 420 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 DCUN1D2Q6PH85 259 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 MON1BQ7L1V2 547 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 RSPH3Q86UC2 560 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 DEFB118Q96PH6 123 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CPXM1Q96SM3 734 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 ADAM2Q99965 735 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 STARD7Q9NQZ5 370 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.18□□□□□ -0.622e-12■■□□□ 14
TPM3-212ENST00000368533 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 TTC7AQ9ULT0 858 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 PTGESO14684 152 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 CYP1A1P04798 512 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 CYP3A5P20815 502 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 IFNAR2P48551 515 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 ZNF132P52740 706 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 SMTNL2Q2TAL5 461 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 RAB6CQ53S08 254 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 C9orf57Q5W0N0 161 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 UBR7Q8N806 425 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 BEST2Q8NFU1 509 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 MAGEC3Q8TD91 643 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
TPM3-212ENST00000368533 SENP6Q9GZR1 1112 aaPredicted RBP11.18□□□□□ -0.62
TPM3-212ENST00000368533 MIS12Q9H081 205 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms