RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FERP16591 822 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 NPR3P17342 541 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 PTPN2P17706 415 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 HOXA9P31269 272 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 KRT9P35527 623 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 PDE6CP51160 858 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 BCAT1P54687 386 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 ASIC2Q16515 512 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 FIGNQ5HY92 759 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 ATAT1Q5SQI0 421 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 GPR149Q86SP6 731 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 ZNF397Q8NF99 534 aaPredicted RBP14.7□□□□□ -0.06
TPM3-211ENST00000368531 CMASQ8NFW8 434 aaPredicted RBP14.7□□□□□ -0.06
TPM3-211ENST00000368531 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 SECISBP2LQ93073 1101 aaKnown RBP14.7□□□□□ -0.06
TPM3-211ENST00000368531 C8orf48Q96LL4 319 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 EDEM3Q9BZQ6 932 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 GRPEL1Q9HAV7 217 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 CAPN11Q9UMQ6 739 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 COG5Q9UP83 839 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 LUC7L2Q9Y383 392 aaKnown RBP14.7□□□□□ -0.06
TPM3-211ENST00000368531 PATJQ8NI35 1801 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 NOTCH4Q99466 2003 aa14.7□□□□□ -0.06
TPM3-211ENST00000368531 MYO16Q9Y6X6 1858 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 A0A1W2PQJ5 194 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 GRXCR2A6NFK2 248 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 PIK3R2O00459 728 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 MMEP08473 750 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 TPM1P09493 284 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 SKILP12757 684 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 RGS7P49802 495 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 SLC8A3P57103 927 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 USP46P62068 366 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 ITIH3Q06033 890 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 BST2Q10589 180 aaKnown RBP14.69□□□□□ -0.06
TPM3-211ENST00000368531 STILQ15468 1287 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 ITIH5Q86UX2 942 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 NUP93Q8N1F7 819 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 SMRP1Q8NCR6 262 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 PSMG2Q969U7 264 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 MRFAP1L1Q96HT8 127 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 CSNK1G1Q9HCP0 422 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 ZNF334Q9HCZ1 680 aaPredicted RBP14.69□□□□□ -0.06
TPM3-211ENST00000368531 MYO6Q9UM54 1294 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 USP15Q9Y4E8 981 aaPredicted RBP14.69□□□□□ -0.06
TPM3-211ENST00000368531 SZT2Q5T011 3432 aa14.69□□□□□ -0.06
TPM3-211ENST00000368531 MBTPS2O43462 519 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 RHOP08100 348 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 CCDC172P0C7W6 258 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 CSH1P0DML2 217 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 CSH2P0DML3 217 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 GJA1P17302 382 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
TPM3-211ENST00000368531 ZBED6P86452 979 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 TRIM14Q14142 442 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 PABPC1LQ4VXU2 614 aaKnown RBP14.68□□□□□ -0.06
TPM3-211ENST00000368531 PKDCCQ504Y2 493 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 E4F1Q66K89 784 aaPredicted RBP14.68□□□□□ -0.06
TPM3-211ENST00000368531 POTEHQ6S545 545 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 DENND5BQ6ZUT9 1274 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 GPRIN1Q7Z2K8 1008 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 IRF2BP2Q7Z5L9 587 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 PIGZQ86VD9 579 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 SCAMP5Q8TAC9 235 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.68□□□□□ -0.06
TPM3-211ENST00000368531 EPS8L1Q8TE68 723 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 IQCDQ96DY2 449 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 SPATA17Q96L03 361 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 RIPOR3Q96MK2 946 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 ASAH2Q9NR71 780 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 SEPT11Q9NVA2 429 aaKnown RBP14.68□□□□□ -0.06
TPM3-211ENST00000368531 ASB3Q9Y575 518 aa14.68□□□□□ -0.06
TPM3-211ENST00000368531 DENND4CQ5VZ89 1909 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 HHLA1C9JL84 531 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 XPO1O14980 1071 aaKnown RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 SETSIPP0DME0 302 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 LCP1P13796 627 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 HMGA1P17096 107 aaKnown RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 CHRNB2P17787 502 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 SP100P23497 879 aaPredicted RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 MTHFRP42898 656 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 SLC5A3P53794 718 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 KLHL30Q0D2K2 578 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 SMAD4Q13485 552 aaKnown RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 LEXMQ3ZCV2 418 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 CYP4A22Q5TCH4 519 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 PDZD4Q76G19 769 aaPredicted RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 SLC35F5Q8WV83 523 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 ING5Q8WYH8 240 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 DDX1Q92499 740 aaKnown RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 TCEAL4Q96EI5 215 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 POMKQ9H5K3 350 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 LRRC4Q9HBW1 653 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 AIPL1Q9NZN9 384 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 THEGQ9P2T0 379 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 NOCTQ9UK39 431 aaKnown RBP14.67□□□□□ -0.06
TPM3-211ENST00000368531 PCDHGC3Q9UN70 934 aa14.67□□□□□ -0.06
TPM3-211ENST00000368531 OBSL1O75147 1896 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms