RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PEBP4Q96S96 227 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 NOD2Q9HC29 1040 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 AKT3Q9Y243 479 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 EVPLQ92817 2033 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 SLC25A27O95847 323 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 GEMIN4P57678 1058 aaKnown RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 SLC10A6Q3KNW5 377 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 PCGF5Q86SE9 256 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 PALM2Q8IXS6 379 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 C12orf29Q8N999 325 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 FBF1Q8TES7 1133 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 HPDLQ96IR7 371 aa18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 PSMC3IPQ9P2W1 217 aaPredicted RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 XPO7Q9UIA9 1087 aaKnown RBP18.96■□□□□ 0.63
UBQLN4-201ENST00000368309 BRCA1P38398 1863 aaKnown RBP18.96■□□□□ 0.62
UBQLN4-201ENST00000368309 WDR91A4D1P6 747 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 C22orf31O95567 290 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 TRUB2O95900 331 aaKnown RBP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 NQO1P15559 274 aaKnown RBP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 ANKLE1Q8NAG6 615 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 CMASQ8NFW8 434 aaPredicted RBP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 UBN1Q9NPG3 1134 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 WDR35Q9P2L0 1181 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 EFR3BQ9Y2G0 817 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 STK38LQ9Y2H1 464 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 PRPF4O43172 522 aaKnown RBP eCLIP18.95■□□□□ 0.622e-6■■■■□ 21.6
UBQLN4-201ENST00000368309 CXorf38Q8TB03 319 aa18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBQLN4-201ENST00000368309 CDH6P55285 790 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 OR6B2Q6IFH4 312 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 LRRN4Q8WUT4 740 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 PRMT7Q9NVM4 692 aaPredicted RBP18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 ERAP1Q9NZ08 941 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 MAP3K6O95382 1288 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 RGS7P49802 495 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 HHATQ5VTY9 493 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 TRNP1Q6NT89 227 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 GBP7Q8N8V2 638 aaPredicted RBP18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 DNAJC25-GNG10A0A024R161 153 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 CFAP73A6NFT4 308 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 FGFR1P11362 822 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 ARF4P18085 180 aaPredicted RBP18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 PHKA2P46019 1235 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 IREB2P48200 963 aaKnown RBP18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 NDST1P52848 882 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 ATP11AP98196 1134 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 TAZQ16635 292 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 EFHC2Q5JST6 749 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 DARS2Q6PI48 645 aaKnown RBP18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 LVRNQ6Q4G3 990 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 IGDCC3Q8IVU1 814 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 MCRS1Q96EZ8 462 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 PDZD7Q9H5P4 517 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 SLC24A2Q9UI40 661 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 CHMP2BQ9UQN3 213 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 MCM3APO60318 1980 aa18.94■□□□□ 0.62
UBQLN4-201ENST00000368309 APOC4-APOC2K7ER74 178 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 MCF2LO15068 1137 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 TYROBPO43914 113 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 APOC2P02655 101 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 PDGFRAP16234 1089 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 CYP3A5P20815 502 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 DPYSL3Q14195 570 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 TTLL4Q14679 1199 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 AMHR2Q16671 573 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 ERO1BQ86YB8 467 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 ATP11CQ8NB49 1132 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 LRRC8CQ8TDW0 803 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 RXFP2Q8WXD0 754 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 SMG5Q9UPR3 1016 aaKnown RBP18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 E5RJQ4 531 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 KRT16P08779 473 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 SLC26A2P50443 739 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 SCYL2Q6P3W7 929 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 ILDR2Q71H61 639 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 PDIK1LQ8N165 341 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 PLCD4Q9BRC7 762 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 ASNSD1Q9NWL6 643 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 WDR90Q96KV7 1748 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 A8MUI8 341 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 PHBP35232 272 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 RNF43Q68DV7 783 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 GRAMD1AQ96CP6 724 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
UBQLN4-201ENST00000368309 MGAMO43451 1857 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 AVILO75366 819 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 ALG13Q9NP73 1137 aaKnown RBP18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 SENP1Q9P0U3 644 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 ZNF286BP0CG31 522 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 TMEM132DQ14C87 1099 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 PDK4Q16654 411 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 CXCL16Q9H2A7 254 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 RNF19AQ9NV58 838 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 TSPAN16Q9UKR8 245 aa18.92■□□□□ 0.62
UBQLN4-201ENST00000368309 L3MBTL1Q9Y468 752 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms