RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 PKN1Q16512 942 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 LRRC8DQ7L1W4 858 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 C11orf96Q7Z7L8 435 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 PORCNQ9H237 461 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 CNOT10Q9H9A5 744 aaKnown RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 GPR25O00155 361 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 MMP3P08254 477 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 PTK6Q13882 451 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 ZNF513Q8N8E2 541 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 ZNF557Q8N988 423 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 EML4Q9HC35 981 aaKnown RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 GIMAP4Q9NUV9 329 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 SELENONQ9NZV5 590 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 XPO7Q9UIA9 1087 aaKnown RBP11.18□□□□□ -0.62
PTPRK-205ENST00000368213 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
PTPRK-205ENST00000368213 SUPT3HB4E1H0 165 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 SUPT3HO75486 399 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 SGPL1O95470 568 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 EPB42P16452 691 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 NAB2Q15742 525 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 CTU1Q7Z7A3 348 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 AHCYL2Q96HN2 611 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 OSBPL8Q9BZF1 889 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.17□□□□□ -0.624e-27■■■□□ 15.4
PTPRK-205ENST00000368213 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 SSU72P8A0A1W2PR75 194 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 H2AFYO75367 372 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ERVK-10P10266 1014 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 HIST2H2ACQ16777 129 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 HIST2H2AA3Q6FI13 130 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 MSL3Q8N5Y2 521 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 OMDQ99983 421 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ZC3H7BQ9UGR2 993 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 PMS2P54278 862 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 LGI2Q8N0V4 545 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 CCDC197Q8NCU1 140 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 C1QTNF7Q9BXJ2 289 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ZNF518BQ9C0D4 1074 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 MIR1-1HGQ9H1L0 117 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ATP13A1Q9HD20 1204 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ARHGDIAP52565 204 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 BYSLQ13895 437 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 DHX34Q14147 1143 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ADGRE3Q9BY15 652 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 AGPAT5Q9NUQ2 364 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 NSMCE4AQ9NXX6 385 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 TSPAN16Q9UKR8 245 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 MOXD2PA6NHM9 499 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 SPATA31C2B4DYI2 1134 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 KPNA3O00505 521 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 KITP10721 976 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 RBP3P10745 1247 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 ITGALP20701 1170 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 RENBPP51606 427 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 AARS2Q5JTZ9 985 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 UBE2Q2Q8WVN8 375 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 MAGEB10Q96LZ2 347 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 TEX12Q9BXU0 123 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 OLFML3Q9NRN5 406 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 APOBEC2Q9Y235 224 aaKnown RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 HES2Q9Y543 173 aa11.17□□□□□ -0.62
PTPRK-205ENST00000368213 COL3A1P02461 1466 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-205ENST00000368213 NT5C1B-RDH14C9J2C7 533 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 COMTP21964 271 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SCNN1BP51168 640 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 UGT3A1Q6NUS8 523 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SYDE1Q6ZW31 735 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 EPM2AIP1Q7L775 607 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 BRSK2Q8IWQ3 736 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 ELOA2Q8IYF1 753 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SLC2A14Q8TDB8 520 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 CCDC124Q96CT7 223 aaKnown RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 TRIM15Q9C019 465 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 POLBP06746 335 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 MMEP08473 750 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 TMEM253P0C7T8 217 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 HDCP19113 662 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 OR1E1P30953 314 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 TRIM65Q6PJ69 517 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 C16orf59Q7L2K0 433 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 ZBTB45Q96K62 511 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 PKD2L2Q9NZM6 624 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SPACA6W5XKT8 324 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 NCAPHQ15003 741 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 ATAT1Q5SQI0 421 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 SV2AQ7L0J3 742 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 TFAP2DQ7Z6R9 452 aa11.16□□□□□ -0.62
PTPRK-205ENST00000368213 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms