RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 DSG1Q02413 1049 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 CLEC16AQ2KHT3 1053 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TFDP3Q5H9I0 405 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TRIM63Q969Q1 353 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 DNAJC19Q96DA6 116 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 FRMD8Q9BZ67 464 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 ZFYVE28Q9HCC9 887 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 NPHS2Q9NP85 383 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 KLK14Q9P0G3 267 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 ORC6Q9Y5N6 252 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 NFAT5O94916 1531 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 LIN7AO14910 233 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 PJA2O43164 708 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 GRIN3BO60391 1043 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 TADA2AO75478 443 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CYTH1Q15438 398 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 AGR3Q8TD06 166 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 KRT35Q92764 455 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 SARS2Q9NP81 518 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 DMAP1Q9NPF5 467 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 UBA6A0AVT1 1052 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 WNT7AO00755 349 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 TFRCP02786 760 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CPT1AP50416 773 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CASP5P51878 434 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ATPAF2Q8N5M1 289 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 SEPT8Q92599 483 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 RMDN1Q96DB5 314 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF446Q9NWS9 450 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 LSM1O15116 133 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CYP3A7P24462 503 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 LAMTOR4Q0VGL1 99 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 STX3Q13277 289 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 VEPH1Q14D04 833 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 UGP2Q16851 508 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CWF19L1Q69YN2 538 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 PATL1Q86TB9 770 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ARHGEF19Q8IW93 802 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ABRAQ8N0Z2 381 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 RAET1EQ8TD07 263 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 ABCF3Q9NUQ8 709 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 S100A1P23297 94 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 GTF2A2P52657 109 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 DCTN2Q13561 401 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 DNAL1Q4LDG9 190 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 EXD1Q8NHP7 514 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 PCMTD2Q9NV79 361 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 WHRNQ9P202 907 aa13.78□□□□□ -0.2
PTPRK-204ENST00000368210 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
PTPRK-204ENST00000368210 PIK3C2AO00443 1686 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 CCDC78A2IDD5 438 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 PSMD10O75832 226 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 TRIM16O95361 564 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 VTNP04004 478 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.2
PTPRK-204ENST00000368210 PTENP60484 403 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 GCNT1Q02742 428 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 MCL1Q07820 350 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 AMHR2Q16671 573 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 HABP4Q5JVS0 413 aaKnown RBP13.77□□□□□ -0.2
PTPRK-204ENST00000368210 PPHLN1Q8NEY8 458 aaKnown RBP13.77□□□□□ -0.2
PTPRK-204ENST00000368210 FLCNQ8NFG4 579 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 ERP27Q96DN0 273 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 ZBTB18Q99592 522 aa13.77□□□□□ -0.2
PTPRK-204ENST00000368210 E5RI56 91 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 PSMD3O43242 534 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 SASH3O75995 380 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 ZCCHC18P0CG32 403 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 HIC1Q14526 733 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CRY2Q49AN0 593 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CAVIN3Q969G5 261 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.21
PTPRK-204ENST00000368210 A0A087WZ62 844 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CELF2O95319 508 aaKnown RBP13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CHRM1P11229 460 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-204ENST00000368210 NCAM1P13591 858 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 CROCCP3Q8IVE0 287 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
PTPRK-204ENST00000368210 NMD3Q96D46 503 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms