RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MYMKA6NI61 221 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 CLDN3O15551 220 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 PRPF40AO75400 957 aaKnown RBP15.79■□□□□ 0.12
VAMP4-202ENST00000367740 CDKL5O76039 1030 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 MUTP22033 750 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 PAX3P23760 479 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 CFHR1Q03591 330 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 KDSRQ06136 332 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 ENOX2Q16206 610 aaKnown RBP15.79■□□□□ 0.12
VAMP4-202ENST00000367740 DDR2Q16832 855 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 FILIP1Q7Z7B0 1213 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 RGL4Q8IZJ4 473 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 ZNF419Q96HQ0 510 aaPredicted RBP15.79■□□□□ 0.12
VAMP4-202ENST00000367740 CLMPQ9H6B4 373 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 CYP8B1Q9UNU6 501 aa15.79■□□□□ 0.12
VAMP4-202ENST00000367740 COL5A1P20908 1838 aaPredicted RBP15.79■□□□□ 0.12
VAMP4-202ENST00000367740 TMEM131Q92545 1883 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 PIRO00625 290 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 CAPN9O14815 690 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 EIF2S3P41091 472 aaKnown RBP15.78■□□□□ 0.12
VAMP4-202ENST00000367740 STRN3Q13033 797 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 RESTQ13127 1097 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 KCNB1Q14721 858 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 DHCR24Q15392 516 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 WSCD1Q658N2 575 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 ZPBP2Q6X784 338 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 DCP1BQ8IZD4 617 aaKnown RBP15.78■□□□□ 0.12
VAMP4-202ENST00000367740 THEM5Q8N1Q8 247 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 PHTF2Q8N3S3 785 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 BRMS1Q9HCU9 246 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 CD93Q9NPY3 652 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 ARHGEF4Q9NR80 690 aa15.78■□□□□ 0.12
VAMP4-202ENST00000367740 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 GOLGA8CPA6NN73 597 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 LEFTY2O00292 366 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 CYB561D2O14569 222 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 TLX3O43711 291 aaPredicted RBP15.77■□□□□ 0.12
VAMP4-202ENST00000367740 FAM189A1O60320 539 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 ADRB2P07550 413 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 ZNF883P0CG24 379 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 GNSP15586 552 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 MAOBP27338 520 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 MCM7P33993 719 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 GRIA2P42262 883 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 TNFRSF4P43489 277 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 SMAD1Q15797 465 aaKnown RBP15.77■□□□□ 0.12
VAMP4-202ENST00000367740 HAUS3Q68CZ6 603 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 JADE1Q6IE81 842 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 METTL23Q86XA0 190 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 ADGRG2Q8IZP9 1017 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 DRC1Q96MC2 740 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 HNRNPABQ99729 332 aaKnown RBP15.77■□□□□ 0.12
VAMP4-202ENST00000367740 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.12
VAMP4-202ENST00000367740 RUSC1Q9BVN2 902 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 CD248Q9HCU0 757 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 TM7SF3Q9NS93 570 aa15.77■□□□□ 0.12
VAMP4-202ENST00000367740 FNDC3AQ9Y2H6 1198 aaKnown RBP15.77■□□□□ 0.12
VAMP4-202ENST00000367740 A0A1W2PQF6 199 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 E9PAM4 449 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 PYCARD-AS1I3L0S3 204 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 PLK4O00444 970 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 SCAMP3O14828 347 aaKnown RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 CILPO75339 1184 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 ZNF217O75362 1048 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 CDC45O75419 566 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 NFICP08651 508 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 MAPTP10636 758 aaKnown RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 HLA-EP13747 358 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 HOXB2P14652 356 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 HDCP19113 662 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 NDUFV2P19404 249 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 CYP2F1P24903 491 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 MATR3P43243 847 aaKnown RBP eCLIP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 SYCP2LQ5T4T6 812 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 ZNF513Q8N8E2 541 aaPredicted RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 TMEM161BQ8NDZ6 487 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 LEO1Q8WVC0 666 aaPredicted RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 TSPAN18Q96SJ8 248 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 CDC6Q99741 560 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 GAREM1Q9H706 876 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 C17orf75Q9HAS0 396 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 DDX19AQ9NUU7 478 aaKnown RBP15.76■□□□□ 0.11
VAMP4-202ENST00000367740 HCN2Q9UL51 889 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 BTBD3Q9Y2F9 522 aa15.76■□□□□ 0.11
VAMP4-202ENST00000367740 TEX51A0A1B0GUA7 166 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 SFI1A8K8P3 1242 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 FLRT2O43155 660 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 CTDNEP1O95476 244 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 CER1O95813 267 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 RPL10AP62906 217 aaKnown RBP15.75■□□□□ 0.11
VAMP4-202ENST00000367740 BNC1Q01954 994 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 RHBDF2Q6PJF5 856 aa15.75■□□□□ 0.11
VAMP4-202ENST00000367740 LRRC69Q6ZNQ3 347 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms