RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PTPN22Q9Y2R2 807 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 TELO2Q9Y4R8 837 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 NRXN3Q9Y4C0 1643 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 A0A088AWK7 358 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 GMNCA6NCL1 334 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 NOTOA8MTQ0 251 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 IFRD1O00458 451 aaPredicted RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 TEX28O15482 410 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 RASSF9O75901 435 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 GLUD1P00367 558 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 CPP00450 1065 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 APODP05090 189 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 HPGDP15428 266 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF10P21506 573 aaPredicted RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 KCNA3P22001 575 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 CES1P23141 567 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 RPL21P46778 160 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SLC12A1Q13621 1099 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ITGA7Q13683 1181 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SBK1Q52WX2 424 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 C10orf120Q5SQS8 335 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 LRRC49Q8IUZ0 686 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 USP38Q8NB14 1042 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 REXO5Q96IC2 774 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ARPC5LQ9BPX5 153 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ZMYND12Q9H0C1 365 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 CLDND1Q9NY35 253 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 APOBEC2Q9Y235 224 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 COL3A1P02461 1466 aaPredicted RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 KCNQ3O43525 872 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 PRKCBP05771 671 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 ALADP13716 330 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 CLK3P49761 638 aaKnown RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 STK4Q13043 487 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 MED21Q13503 144 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 BAATQ14032 418 aaPredicted RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TFDP2Q14188 446 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 P3H1Q32P28 736 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 ARSJQ5FYB0 599 aaPredicted RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 AGAP9Q5VTM2 703 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 PCGF5Q86SE9 256 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 CHERPQ8IWX8 916 aaKnown RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 MMGT1Q8N4V1 131 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TMEM35BQ8NCS4 154 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 SLC7A14Q8TBB6 771 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 FANCLQ9NW38 375 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TUBE1Q9UJT0 475 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 MAP2P11137 1827 aaKnown RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TRIM43BA6NCK2 446 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 NPTXRO95502 500 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TAC1P20366 129 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TARSP26639 723 aaKnown RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 HSPA9P38646 679 aaKnown RBP8.96□□□□□ -0.98
SYNE1-206ENST00000367253 MTHFRP42898 656 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 ACAP2Q15057 778 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 FAM83AQ86UY5 434 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 RASSF3Q86WH2 238 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 CHSY1Q86X52 802 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 RNF149Q8NC42 400 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 EXD1Q8NHP7 514 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 CITED4Q96RK1 184 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 MED15Q96RN5 788 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 TMEM260Q9NX78 707 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 SLC39A10Q9ULF5 831 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 SPATA2Q9UM82 520 aa8.96□□□□□ -0.98
SYNE1-206ENST00000367253 ANO9A1A5B4 782 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 NR3C2P08235 984 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SDC4P31431 198 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 TECP42680 631 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 COTL1Q14019 142 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 DGKKQ5KSL6 1271 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SPOPLQ6IQ16 392 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 IYDQ6PHW0 289 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 C16orf62Q7Z3J2 963 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 MARCH10Q8NA82 808 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SSH3Q8TE77 659 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 PBKQ96KB5 322 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 PANX2Q96RD6 677 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 BBS4Q96RK4 519 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 EIF2AK1Q9BQI3 630 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 TUBGCP2Q9BSJ2 902 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 ZNF225Q9UK10 706 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RBMX2Q9Y388 322 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 A0A087WZ62 844 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 IL18RAPO95256 599 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RPN1P04843 607 aaKnown RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RPN2P04844 631 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 MXI1P50539 228 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 BACE1P56817 501 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 RESTQ13127 1097 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 SLC44A2Q8IWA5 706 aaPredicted RBP8.95□□□□□ -0.98
SYNE1-206ENST00000367253 BTBD6Q96KE9 485 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 EGFL8Q99944 293 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 STRADBQ9C0K7 418 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 ASNSD1Q9NWL6 643 aa8.95□□□□□ -0.98
SYNE1-206ENST00000367253 GPRC5DQ9NZD1 345 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms