RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 PPP2R3CQ969Q6 453 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 THAP11Q96EK4 314 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 LACRTQ9GZZ8 138 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 DYRK4Q9NR20 520 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 NCKIPSDQ9NZQ3 722 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 MST1RQ04912 1400 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 KPNA6O60684 536 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZFP1Q6P2D0 407 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 C15orf52Q6ZUT6 534 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ERI2A8K979 691 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 GOLGA8RI6L899 631 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 DRG2P55039 364 aaKnown RBP12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 KCNK10P57789 538 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 DEFA1P59665 94 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 DEFA3P59666 94 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 TRIP10Q15642 601 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 RPS6KL1Q9Y6S9 549 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 MAGEA13PA6NCF6 341 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF263O14978 683 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 GOLGA7BQ2TAP0 167 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 FBXW10Q5XX13 1052 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 KIAA0895Q8NCT3 520 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 MED24O75448 989 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ITGA4P13612 1032 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 MAPK1P28482 360 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 CDK7P50613 346 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 PLA2G4FQ68DD2 849 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 SPON2Q9BUD6 331 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ATP9BO43861 1147 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 PSMD7P51665 324 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ABRAQ8N0Z2 381 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ANKZF1Q9H8Y5 726 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZBBXA8MT70 800 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 GEMP55040 296 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 RAD54BQ9Y620 910 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ANKRD6Q9Y2G4 727 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 EVPLLA8MZ36 301 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 NPM3O75607 178 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 CHI3L2Q15782 390 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 CDC42EP4Q9H3Q1 356 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 SAR1AQ9NR31 198 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ARHGAP20Q9P2F6 1191 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 CITO14578 2027 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZC3H4Q9UPT8 1303 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 HABP4Q5JVS0 413 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 PALB2Q86YC2 1186 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 TAGAPQ8N103 731 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 PKP3Q9Y446 797 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 PAX3P23760 479 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 LHX1P48742 406 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DACH2Q96NX9 599 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 VTI1BQ9UEU0 232 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 A0A1B0GW55 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 C2orf81A6NN90 581 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L2P0CJ85 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L3P0CJ86 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L4P0CJ87 422 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L5P0CJ88 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L6P0CJ89 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4L7P0CJ90 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 TSHRP16473 764 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 DUX4Q9UBX2 424 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 RNF135Q8IUD6 432 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ARL8AQ96BM9 186 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ELMO2Q96JJ3 720 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ASB7Q9H672 318 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 SARS2Q9NP81 518 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 UTP6Q9NYH9 597 aaKnown RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ENOPH1Q9UHY7 261 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 AKAP10O43572 662 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 GTF2H3Q13889 308 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 TMEM259Q4ZIN3 620 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF669Q96BR6 464 aaPredicted RBP12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 GANQ9H2C0 597 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 C10orf88Q9H8K7 445 aa12.47□□□□□ -0.41
CDC42BPA-203ENST00000366766 HOXA2O43364 376 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 HNRNPH3P31942 346 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ARID3BQ8IVW6 561 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 NUMA1Q14980 2115 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 HACD1B0YJ81 288 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 C5orf58C9J3I9 102 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 C6orf10Q5SRN2 563 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 LRRC38Q5VT99 294 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 AP3M1Q9Y2T2 418 aa12.46□□□□□ -0.41
CDC42BPA-203ENST00000366766 NFAT5O94916 1531 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms