RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TCF20Q9UGU0 1960 aaKnown RBP2.89□□□□□ -1.95
RNU6-238P-201ENST00000363313 M0R3H8 397 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 ACOT8O14734 319 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 SLC16A6O15403 523 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 GPR39O43194 453 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 MT-CO3P00414 261 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 CHRM3P20309 590 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 EDNRBP24530 442 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 TMPRSS15P98073 1019 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 CFHR1Q03591 330 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 IL10RAQ13651 578 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 IQCB1Q15051 598 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 AMOTQ4VCS5 1084 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 L1TD1Q5T7N2 865 aaKnown RBP2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 THEMIS2Q5TEJ8 643 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 GFI1BQ5VTD9 330 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 ZNF549Q6P9A3 640 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 BCDIN3DQ7Z5W3 292 aaKnown RBP2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 C3orf20Q8ND61 904 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 B4GALNT2Q8NHY0 566 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 XAGE5Q8WWM1 108 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 CAMK1GQ96NX5 476 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 TMEM8AQ9HCN3 771 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 MRPS18AQ9NVS2 196 aaKnown RBP2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 TUBD1Q9UJT1 453 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 LIMCH1Q9UPQ0 1083 aa2.88□□□□□ -1.95
RNU6-238P-201ENST00000363313 SPTLC2O15270 562 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 GCATO75600 419 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 PIM1P11309 404 aaPredicted RBP2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 LRPAP1P30533 357 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 PDE6CP51160 858 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 PGGT1BP53609 377 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 GYS2P54840 703 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 KRT85P78386 507 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 SATB1Q01826 763 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 BOP1Q14137 746 aaKnown RBP2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 RNASE12Q5GAN4 147 aaKnown RBP2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 ZNF548Q8NEK5 533 aaPredicted RBP2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 WDR66Q8TBY9 1149 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 CHAC2Q8WUX2 184 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 DNASE2BQ8WZ79 361 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 JADE3Q92613 823 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 COA7Q96BR5 231 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 R3HDM4Q96D70 268 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 SLC46A1Q96NT5 459 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 VRK1Q99986 396 aaPredicted RBP2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 ASIC5Q9NY37 505 aa2.87□□□□□ -1.95
RNU6-238P-201ENST00000363313 IGLV5-39A0A0G2JS06 123 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 CCDC154A6NI56 674 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 PDE8BO95263 885 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 FGAP02671 866 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 CYP2C9P11712 490 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 VIPR2P41587 438 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 ALDH5A1P51649 535 aaPredicted RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 DSC2Q02487 901 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 INAVAQ3KP66 663 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 C3orf36Q3SXR2 165 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 ZNF585BQ52M93 769 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 ARHGAP40Q5TG30 622 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 DENND2CQ68D51 928 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 CAPRIN2Q6IMN6 1127 aaKnown RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 RAB11FIP4Q86YS3 637 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 SLC15A3Q8IY34 581 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 SIRT6Q8N6T7 355 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 FAM167AQ96KS9 214 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 DPCDQ9BVM2 203 aaPredicted RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 SEMA4BQ9NPR2 832 aaPredicted RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 TMEM184CQ9NVA4 438 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 AMFRQ9UKV5 643 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 NDRG4Q9ULP0 352 aaKnown RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 SHOC2Q9UQ13 582 aa2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.86□□□□□ -1.95
RNU6-238P-201ENST00000363313 KLHL33A6NCF5 533 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 M0QYG6 137 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 DCLK1O15075 740 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 IGKV3-20P01619 116 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 C5AR1P21730 350 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 B4GALNT1Q00973 533 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 SP2Q02086 613 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 TMTC4Q5T4D3 741 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 EMC10Q5UCC4 262 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 RGS7BPQ6MZT1 257 aaPredicted RBP2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 FBXL22Q6P050 247 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 CUZD1Q86UP6 607 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 CPA6Q8N4T0 437 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 FAM46DQ8NEK8 389 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 BCAS4Q8TDM0 211 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 TMEM255BQ8WV15 326 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 DRC1Q96MC2 740 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 MRPL46Q9H2W6 279 aaKnown RBP2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 ZBTB40Q9NUA8 1239 aa2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 MRPL42Q9Y6G3 142 aaKnown RBP2.85□□□□□ -1.95
RNU6-238P-201ENST00000363313 GAS8-AS1O95177 125 aa2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 NGFRP08138 427 aa2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 XRCC6P12956 609 aaKnown RBP eCLIP2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 TBXAS1P24557 533 aaPredicted RBP2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 CDC25AP30304 524 aa2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 SUMO2P61956 95 aaKnown RBP2.84□□□□□ -1.95
RNU6-238P-201ENST00000363313 MTX1Q13505 466 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms