RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 UVRAGQ9P2Y5 699 aa9.62□□□□□ -0.87
CALD1-202ENST00000361901 HEY1Q9Y5J3 304 aa9.62□□□□□ -0.87
CALD1-202ENST00000361901 GRIN2DO15399 1336 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATXN2Q99700 1313 aaKnown RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 GOLGA8MH3BSY2 632 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CAPN15O75808 1086 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 EDN1P05305 212 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 GZMAP12544 262 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ANXA13P27216 316 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 NDST1P52848 882 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 NFIL3Q16649 462 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATP13A4Q4VNC1 1196 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 RNF220Q5VTB9 566 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CRELD2Q6UXH1 353 aaPredicted RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 CCDC33Q8N5R6 958 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 OR2W6PQ8NHA6 318 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 C18orf25Q96B23 403 aaPredicted RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 EIF2AQ9BY44 585 aaKnown RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 HAPLN2Q9GZV7 340 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 WNT8AQ9H1J5 351 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 KCNK9Q9NPC2 374 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 METTL5Q9NRN9 209 aaKnown RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATXN10Q9UBB4 475 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CACNG4Q9UBN1 327 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 COG5Q9UP83 839 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 TNFSF13BQ9Y275 285 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 PASKQ96RG2 1323 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CASTOR2A6NHX0 329 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CCDC188H7C350 402 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 STBD1O95210 358 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 POMCP01189 267 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 TROVE2P10155 538 aaKnown RBP eCLIP9.61□□□□□ -0.87
CALD1-202ENST00000361901 PYGMP11217 842 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATN1P54259 1190 aaPredicted RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATP11CQ8NB49 1132 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 LPPQ93052 612 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 SPATA17Q96L03 361 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 FMO2Q99518 471 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 PIDD1Q9HB75 910 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CDHR5Q9HBB8 845 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 UTP6Q9NYH9 597 aaKnown RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 FBXL5Q9UKA1 691 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 PRPSAP2O60256 369 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ZC3H11AO75152 810 aaKnown RBP eCLIP9.61□□□□□ -0.87
CALD1-202ENST00000361901 VNN1O95497 513 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 LINGO3P0C6S8 592 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 ATF2P15336 505 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 PDGFRAP16234 1089 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 SERPINB3P29508 390 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 GHRHRQ02643 423 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 MBTD1Q05BQ5 628 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CCDC15Q0P6D6 951 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 GLE1Q53GS7 698 aaKnown RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 TTMPQ5BVD1 217 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 DNAJC14Q6Y2X3 702 aaPredicted RBP9.61□□□□□ -0.87
CALD1-202ENST00000361901 TRIM72Q6ZMU5 477 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 RHOT1Q8IXI2 618 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 CENPKQ9BS16 269 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 KAT6AQ92794 2004 aa9.61□□□□□ -0.87
CALD1-202ENST00000361901 NRCAMQ92823 1304 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SOCS7O14512 581 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 ACSL3O95573 720 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 RALAP11233 206 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 RPL7AP62424 266 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 TARBP2Q15633 366 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 GOLGA7BQ2TAP0 167 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SLC27A1Q6PCB7 646 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 FEZF2Q8TBJ5 459 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SH3GL2Q99962 352 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 ZSWIM1Q9BR11 485 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 OSBPL7Q9BZF2 842 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 MAGED2Q9UNF1 606 aaPredicted RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 HNRNPRO43390 633 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 MCF2P10911 925 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 PRKAR2AP13861 404 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 HTRA3P83110 453 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 PTPN11Q06124 597 aaPredicted RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 DMPKQ09013 629 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 DENND2CQ68D51 928 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SAPCD2Q86UD0 394 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 ZC3H3Q8IXZ2 948 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 ALG3Q92685 438 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 CHMP6Q96FZ7 201 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 ZFP42Q96MM3 310 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 NUDCD1Q96RS6 583 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 INTS9Q9NV88 658 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 DNAJC25-GNG10A0A024R161 153 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 I3L4J1 428 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 MAPK13O15264 365 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 B3GAT3O94766 335 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 SUN1O94901 812 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 NQO1P15559 274 aaKnown RBP9.6□□□□□ -0.87
CALD1-202ENST00000361901 GSTT1P30711 240 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 MLH1P40692 756 aa9.6□□□□□ -0.87
CALD1-202ENST00000361901 MAGOHP61326 146 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms