RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CCDC142Q17RM4 750 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 EFHC2Q5JST6 749 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 THEMIS2Q5TEJ8 643 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 PHC3Q8NDX5 983 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 GRAMD1AQ96CP6 724 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 C12orf42Q96LP6 360 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SYT15Q9BQS2 421 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 MAGEB5Q9BZ81 275 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 WASF2Q9Y6W5 498 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.08□□□□□ -0.64
SMC3-201ENST00000361804 KBTBD13C9JR72 458 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMC3-201ENST00000361804 F7P08709 466 aaPredicted RBP11.08□□□□□ -0.64
SMC3-201ENST00000361804 CLDN10P78369 228 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CCDC15Q0P6D6 951 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CAPSQ13938 189 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SGSM1Q2NKQ1 1148 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 ACSBG2Q5FVE4 666 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CIAPIN1Q6FI81 312 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 RFX6Q8HWS3 928 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 MCPH1Q8NEM0 835 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 RSAD2Q8WXG1 361 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 TWNKQ96RR1 684 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CPXM1Q96SM3 734 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 TMEM120AQ9BXJ8 343 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 KCNK13Q9HB14 408 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 PIH1D1Q9NWS0 290 aaKnown RBP11.08□□□□□ -0.64
SMC3-201ENST00000361804 A0A0B4J269 797 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CXorf49A8MYA2 514 aaPredicted RBP11.08□□□□□ -0.64
SMC3-201ENST00000361804 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 ALDH3A1P30838 453 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CETN2P41208 172 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 YWHAGP61981 247 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMC3-201ENST00000361804 ZBTB16Q05516 673 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 BLMHQ13867 455 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 TEX2Q8IWB9 1127 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 NAT8LQ8N9F0 302 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CGRRF1Q99675 332 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SLC13A1Q9BZW2 595 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 MANSC1Q9H8J5 431 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 SLC17A6Q9P2U8 582 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 DCTN3O75935 186 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SKIV2L2P42285 1042 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 BACE1P56817 501 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SLC25A11Q02978 314 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 ZCCHC23Q6ZST2 131 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SLC25A41Q8N5S1 370 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 NMRK1Q9NWW6 199 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PIM2Q9P1W9 311 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 SPTBN5Q9NRC6 3674 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 B4GALT5O43286 388 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 LPXNO60711 386 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 AMPD1P23109 780 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 BANPQ8N9N5 519 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PGLYRP2Q96PD5 576 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 TSSK1BQ9BXA7 367 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 NMUR2Q9GZQ4 415 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PCDH9Q9HC56 1237 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 EYSQ5T1H1 3165 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SPDYE16A6NNV3 312 aaPredicted RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 PTK7Q13308 1070 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 RCN2Q14257 317 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 C15orf59Q2T9L4 293 aaPredicted RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 GNPTABQ3T906 1256 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 RIBC1Q8N443 379 aaPredicted RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 TTC25Q96NG3 672 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PEBP4Q96S96 227 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 DDX50Q9BQ39 737 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 IMPG2Q9BZV3 1241 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 SNCAIPQ9Y6H5 919 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 IGKV6D-21A0A0A0MT36 114 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ABLIM1O14639 778 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ERBB2P04626 1255 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 MYL2P10916 166 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 KRT3P12035 628 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ZNF132P52740 706 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ARL4CP56559 192 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PSMC1P62191 440 aaKnown RBP11.07□□□□□ -0.64
SMC3-201ENST00000361804 PARP6Q2NL67 630 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 PPP1R15BQ5SWA1 713 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 TDRPQ86YL5 185 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 NIM1KQ8IY84 436 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 UBA3Q8TBC4 463 aa11.07□□□□□ -0.64
SMC3-201ENST00000361804 ATP2A1O14983 1001 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 USP2O75604 605 aaPredicted RBP11.06□□□□□ -0.64
SMC3-201ENST00000361804 STAM2O75886 525 aa11.06□□□□□ -0.64
SMC3-201ENST00000361804 ASS1P00966 412 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms