RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 IQSEC1Q6DN90 963 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 LRRC8EQ6NSJ5 796 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 ADGRA2Q96PE1 1338 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 F8VZ95 297 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 PSTPIP1O43586 416 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CCDC22O60826 627 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 ATP5HO75947 161 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 OXCT1P55809 520 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 KIAA0895Q8NCT3 520 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 STAMBPL1Q96FJ0 436 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 CYP3A43Q9HB55 503 aa19.31■□□□□ 0.68
CLIP2-202ENST00000361545 FAF1Q9UNN5 650 aaPredicted RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 SMG5Q9UPR3 1016 aaKnown RBP19.31■□□□□ 0.68
CLIP2-202ENST00000361545 UBA1P22314 1058 aaKnown RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 BST2Q10589 180 aaKnown RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 SGO1Q5FBB7 561 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 DNAAF5Q86Y56 855 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 ZBTB45Q96K62 511 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 TINF2Q9BSI4 451 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 MYL2P10916 166 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 NDST1P52848 882 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 PMS1P54277 932 aaKnown RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 DGKZQ13574 1117 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 CCNI2Q6ZMN8 369 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 NIPA1Q7RTP0 329 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 RUBCNLQ9H714 662 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 PTK6Q13882 451 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 RXFP2Q8WXD0 754 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 AP4E1Q9UPM8 1137 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 MRPL40Q9NQ50 206 aaKnown RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 ADCY3O60266 1144 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 LZTS3O60299 673 aaPredicted RBP19.3■□□□□ 0.68
CLIP2-202ENST00000361545 FBXO21O94952 628 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 PGK1P00558 417 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 KLRC2P26717 231 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 KDSRQ06136 332 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 LINC00523Q86TU6 105 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 DNAJC7Q99615 494 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 ZCWPW1Q9H0M4 648 aa19.3■□□□□ 0.68
CLIP2-202ENST00000361545 ACKR2O00590 384 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 ANGPT2O15123 496 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 SNRPAP09012 282 aaKnown RBP19.29■□□□□ 0.68
CLIP2-202ENST00000361545 SGF29Q96ES7 293 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 ZNF518BQ9C0D4 1074 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 CARD9Q9H257 536 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 KIF17Q9P2E2 1029 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 STMN1P16949 149 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 STIP1P31948 543 aaKnown RBP19.29■□□□□ 0.68
CLIP2-202ENST00000361545 ERFP50548 548 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 RRM2BQ7LG56 351 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 NSMCE4AQ9NXX6 385 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 MYPNQ86TC9 1320 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 CHN1P15882 459 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 PDGFDQ9GZP0 370 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-202ENST00000361545 USP18Q9UMW8 372 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 HEATR9A2RTY3 570 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 LACTBL1A8MY62 500 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 CBX4O00257 560 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 RHOCP08134 193 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 TGM2P21980 687 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 GEMP55040 296 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 DEFB115Q30KQ5 88 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 ACBD5Q5T8D3 534 aaPredicted RBP19.29■□□□□ 0.68
CLIP2-202ENST00000361545 APOL2Q9BQE5 337 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 INTS13Q9NVM9 706 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 SMPD4Q9NXE4 827 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 TSPAN16Q9UKR8 245 aa19.29■□□□□ 0.68
CLIP2-202ENST00000361545 MAPRE2Q15555 327 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 PKN3Q6P5Z2 889 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 NOA1Q8NC60 698 aaKnown RBP19.28■□□□□ 0.68
CLIP2-202ENST00000361545 ING2Q9H160 280 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 NPHS2Q9NP85 383 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 OSGEPQ9NPF4 335 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 CYP39A1Q9NYL5 469 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 PCDHB5Q9Y5E4 795 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 TRPV2Q9Y5S1 764 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 C2orf81A6NN90 581 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 SPAG6O75602 509 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 CCDC60Q8IWA6 550 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-202ENST00000361545 ADAM2Q99965 735 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 BARX2Q9UMQ3 279 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-202ENST00000361545 RPS6KL1Q9Y6S9 549 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 TRADDQ15628 312 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 CNPY3Q9BT09 278 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 THEGQ9P2T0 379 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 TFDP3Q5H9I0 405 aa19.28■□□□□ 0.68
CLIP2-202ENST00000361545 ZNF571Q7Z3V5 609 aaPredicted RBP19.28■□□□□ 0.68
CLIP2-202ENST00000361545 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■■■■ 65.3
CLIP2-202ENST00000361545 DDHD2O94830 711 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 CDH8P55286 799 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 OTUD4Q01804 1114 aaKnown RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 PDK2Q15119 407 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 CCDC157Q569K6 752 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 ARMC6Q6NXE6 501 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 C4orf22Q6V702 233 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 TRIML2Q8N7C3 387 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 RUBCNQ92622 972 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 ECT2Q9H8V3 914 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms