RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 PI4K2AQ9BTU6 479 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 PRR23AA6NEV1 266 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 MAP3K7CLP57077 242 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ITGA9Q13797 1035 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ADGRF2Q8IZF7 708 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ERP44Q9BS26 406 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 AGPAT5Q9NUQ2 364 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ZNF185O15231 689 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 PPP4CP60510 307 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 MRPL48Q96GC5 212 aaKnown RBP21.04■□□□□ 0.96
SMURF1-202ENST00000361368 AGPAT3Q9NRZ7 376 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 TIMM44O43615 452 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 CCDC159P0C7I6 412 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 DENND1BQ6P3S1 775 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 XPO6Q96QU8 1125 aaKnown RBP21.04■□□□□ 0.96
SMURF1-202ENST00000361368 CLPBQ9H078 707 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ILKAPQ9H0C8 392 aaPredicted RBP21.04■□□□□ 0.96
SMURF1-202ENST00000361368 DCDC2Q9UHG0 476 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 COILP38432 576 aaPredicted RBP21.04■□□□□ 0.96
SMURF1-202ENST00000361368 CSE1LP55060 971 aaKnown RBP21.04■□□□□ 0.96
SMURF1-202ENST00000361368 VSNL1P62760 191 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 FMR1Q06787 632 aaKnown RBP eCLIP21.04■□□□□ 0.968e-8■■■■■ 27.8
SMURF1-202ENST00000361368 PHACTR4Q8IZ21 702 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 KANSL3Q9P2N6 904 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 ZNF609O15014 1411 aa21.04■□□□□ 0.96
SMURF1-202ENST00000361368 GLRA3O75311 464 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 RRM2P31350 389 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 PDIA6Q15084 440 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 SLC15A2Q16348 729 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 NFE2Q16621 373 aaPredicted RBP21.03■□□□□ 0.96
SMURF1-202ENST00000361368 CCDC142Q17RM4 750 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 IRAK1BP1Q5VVH5 260 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 UBE2Q2LH0YL09 131 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 THP07101 528 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 RHOCP08134 193 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 PYGMP11217 842 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 CHI3L1P36222 383 aaPredicted RBP21.03■□□□□ 0.96
SMURF1-202ENST00000361368 PREPLQ4J6C6 727 aaPredicted RBP21.03■□□□□ 0.96
SMURF1-202ENST00000361368 DAB2IPQ5VWQ8 1189 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 ZNF513Q8N8E2 541 aaPredicted RBP21.03■□□□□ 0.96
SMURF1-202ENST00000361368 DDI1Q8WTU0 396 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 NAT9Q9BTE0 207 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 KLC4Q9NSK0 619 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 USP27XA6NNY8 438 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 HPGDP15428 266 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 CLK1P49759 484 aaKnown RBP21.03■□□□□ 0.96
SMURF1-202ENST00000361368 CHI3L2Q15782 390 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 MIB1Q86YT6 1006 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 C3orf20Q8ND61 904 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 WDR24Q96S15 920 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 CAPN10Q9HC96 672 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 STARD7Q9NQZ5 370 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 PLA2G4CQ9UP65 541 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 MSH4O15457 936 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 IFNA14P01570 189 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 YY1P25490 414 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 SLFN11Q7Z7L1 901 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 ADGRE3Q9BY15 652 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 ADAM33Q9BZ11 813 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 IMPAD1Q9NX62 359 aa21.03■□□□□ 0.96
SMURF1-202ENST00000361368 HOXC6P09630 235 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 SERPINB8P50452 374 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 RHOAP61586 193 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 ILF2Q12905 390 aaKnown RBP21.02■□□□□ 0.96
SMURF1-202ENST00000361368 ZNF333Q96JL9 665 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 PNKPQ96T60 521 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 THTPAQ9BU02 230 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 USE1Q9NZ43 259 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 VPS28Q9UK41 221 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 ZNF544Q6NX49 715 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 CYP4Z1Q86W10 505 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 SUGP1Q8IWZ8 645 aaKnown RBP21.02■□□□□ 0.96
SMURF1-202ENST00000361368 DPF2Q92785 391 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 RAB27AP51159 221 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 KYNUQ16719 465 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 MROH9Q5TGP6 573 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 IYDQ6PHW0 289 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 THUMPD3Q9BV44 507 aaKnown RBP21.02■□□□□ 0.96
SMURF1-202ENST00000361368 THG1LQ9NWX6 298 aaKnown RBP21.02■□□□□ 0.96
SMURF1-202ENST00000361368 ZCCHC11Q5TAX3 1644 aaKnown RBP21.02■□□□□ 0.96
SMURF1-202ENST00000361368 M0R3G1 203 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 SLC16A1P53985 500 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 STARD3Q14849 445 aa21.02■□□□□ 0.96
SMURF1-202ENST00000361368 HSPA13P48723 471 aa21.02■□□□□ 0.95
SMURF1-202ENST00000361368 BACE1P56817 501 aa21.02■□□□□ 0.95
SMURF1-202ENST00000361368 CCNI2Q6ZMN8 369 aaPredicted RBP21.02■□□□□ 0.95
SMURF1-202ENST00000361368 USP38Q8NB14 1042 aa21.02■□□□□ 0.95
SMURF1-202ENST00000361368 ISCUQ9H1K1 167 aa21.02■□□□□ 0.95
SMURF1-202ENST00000361368 B2RBV5 119 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 ACTN3Q08043 901 aaPredicted RBP21.01■□□□□ 0.95
SMURF1-202ENST00000361368 GLRA4Q5JXX5 417 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 ZNF473Q8WTR7 871 aaKnown RBP21.01■□□□□ 0.95
SMURF1-202ENST00000361368 PDGFCQ9NRA1 345 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 TMCC3Q9ULS5 477 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 ATMINO43313 823 aaPredicted RBP21.01■□□□□ 0.95
SMURF1-202ENST00000361368 PAN2Q504Q3 1202 aaKnown RBP21.01■□□□□ 0.95
SMURF1-202ENST00000361368 PRPF39Q86UA1 669 aaKnown RBP21.01■□□□□ 0.95
SMURF1-202ENST00000361368 BHMTQ93088 406 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 RAD54BQ9Y620 910 aa21.01■□□□□ 0.95
SMURF1-202ENST00000361368 RPS6KL1Q9Y6S9 549 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms