RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 PDGFRBP09619 1106 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 PMLP29590 882 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 OPRD1P41143 372 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 PDE6CP51160 858 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 USP46P62068 366 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 SLC39A14Q15043 492 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 SURF1Q15526 300 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.16
GDPD3-201ENST00000360688 DUOXA2Q1HG44 320 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 CCDC65Q8IXS2 484 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 PDILTQ8N807 584 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 HPS3Q969F9 1004 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 CEP295NLQ96MC4 621 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 TRPM5Q9NZQ8 1165 aa16.08■□□□□ 0.16
GDPD3-201ENST00000360688 MYO18AQ92614 2054 aaKnown RBP16.07■□□□□ 0.16
GDPD3-201ENST00000360688 BCLAF3A2AJT9 711 aaKnown RBP16.07■□□□□ 0.16
GDPD3-201ENST00000360688 ANTXRLA6NF34 631 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 RHOBTB1O94844 696 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 PFKLP17858 780 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 WARSP23381 471 aaKnown RBP16.07■□□□□ 0.16
GDPD3-201ENST00000360688 HOXD13P35453 343 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 GRIK1P39086 918 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 DGKEP52429 567 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 CYP27A1Q02318 531 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 CREB5Q02930 508 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 GAB4Q2WGN9 574 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 RNF43Q68DV7 783 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 DENND5BQ6ZUT9 1274 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 WDR49Q8IV35 697 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 PCED1BQ96HM7 432 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 TTLL2Q9BWV7 592 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 LSM14BQ9BX40 385 aaKnown RBP16.07■□□□□ 0.16
GDPD3-201ENST00000360688 HSPBP1Q9NZL4 362 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
GDPD3-201ENST00000360688 ZFHX4Q86UP3 3567 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 K7EQS6 105 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 LEFTY2O00292 366 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 SEC13P55735 322 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 STXBP4Q6ZWJ1 553 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 TSTD1Q8NFU3 115 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 MYCBPAPQ8TBZ2 947 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 MMS19Q96T76 1030 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 TPSD1Q9BZJ3 242 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 INVSQ9Y283 1065 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 NME7Q9Y5B8 376 aa16.06■□□□□ 0.16
GDPD3-201ENST00000360688 ZNF840PA6NDX5 716 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 F8VP50 259 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 TRIM66O15016 1216 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 KCNK5O95279 499 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 CAVIN2O95810 425 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
GDPD3-201ENST00000360688 ANXA13P27216 316 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 GBP1P32455 592 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
GDPD3-201ENST00000360688 SLC7A9P82251 487 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 SHC2P98077 582 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 MDH1BQ5I0G3 518 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 TRAPPC11Q7Z392 1133 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 RASSF3Q86WH2 238 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
GDPD3-201ENST00000360688 EDEM2Q9BV94 578 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 TRIM9Q9C026 710 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 KIAA1586Q9HCI6 787 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 MTMR6Q9Y217 621 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 CPQQ9Y646 472 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 GON4LQ3T8J9 2241 aa16.05■□□□□ 0.16
GDPD3-201ENST00000360688 OLFM2O95897 454 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 CYP17A1P05093 508 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-201ENST00000360688 PPP3CCP48454 512 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 NASPP49321 788 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-201ENST00000360688 CACNA2D1P54289 1103 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 E2F4Q16254 413 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
GDPD3-201ENST00000360688 USP39Q53GS9 565 aaKnown RBP16.04■□□□□ 0.16
GDPD3-201ENST00000360688 PMS2CLQ68D20 193 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 EPM2AIP1Q7L775 607 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-201ENST00000360688 HS2ST1Q7LGA3 356 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 KIAA1958Q8N8K9 716 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 RDH13Q8NBN7 331 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 C8orf48Q96LL4 319 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 SNX25Q9H3E2 840 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 KBTBD4Q9NVX7 518 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 SMPD4Q9NXE4 827 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 PI4KAP42356 2102 aa16.04■□□□□ 0.16
GDPD3-201ENST00000360688 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
GDPD3-201ENST00000360688 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
GDPD3-201ENST00000360688 TACC1O75410 805 aa16.03■□□□□ 0.16
GDPD3-201ENST00000360688 OAS1P00973 400 aaKnown RBP16.03■□□□□ 0.16
GDPD3-201ENST00000360688 DLATP10515 647 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms