RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ABCA7Q8IZY2 2146 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 OBSL1O75147 1896 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 C2orf78A6NCI8 922 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 TISP43B9A030 160 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 SLC9A3R1O14745 358 aaPredicted RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 HYAL3O43820 417 aaPredicted RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 ITGB3P05106 788 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 C7P10643 843 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 ENGP17813 658 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 ACAT1P24752 427 aaKnown RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 PPP3CCP48454 512 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 SIM1P81133 766 aaPredicted RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 RING1Q06587 406 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 MCM6Q14566 821 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 GSE1Q14687 1217 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 ZC2HC1CQ53FD0 456 aaPredicted RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 LYSMD4Q5XG99 296 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 VSTM1Q6UX27 236 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 RABEPKQ7Z6M1 372 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 ADGRF2Q8IZF7 708 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 HDDC3Q8N4P3 179 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 KRI1Q8N9T8 703 aaKnown RBP14.83□□□□□ -0.04
VPS29-201ENST00000360579 CEP76Q8TAP6 659 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 SPATA17Q96L03 361 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 PNKPQ96T60 521 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 BLOC1S4Q9NUP1 217 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 TRPM5Q9NZQ8 1165 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS29-201ENST00000360579 EXOC7Q9UPT5 735 aa14.83□□□□□ -0.04
VPS29-201ENST00000360579 ANK1P16157 1881 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 LEFTY2O00292 366 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 GABRDO14764 452 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 LDHAP00338 332 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 APODP05090 189 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 PYGBP11216 843 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 PLCG1P19174 1290 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 ADSSP30520 456 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 PTGER3P43115 390 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 RBP5P82980 135 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 SEMA3BQ13214 749 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 HNRNPDQ14103 355 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 MAPRE1Q15691 268 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 PEAR1Q5VY43 1037 aaPredicted RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 TMEM92Q6UXU6 159 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 ZNF720Q7Z2F6 126 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 PIP4P1Q86T03 277 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 BRSK2Q8IWQ3 736 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 TMEFF1Q8IYR6 380 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 ALLCQ8N6M5 410 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 C1orf127Q8N9H9 656 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 IL17RCQ8NAC3 791 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 TXNDC5Q8NBS9 432 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 LRRC15Q8TF66 581 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 LARP4BQ92615 738 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 FNBP1Q96RU3 617 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 FAM213AQ9BRX8 229 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 MAGEC2Q9UBF1 373 aaPredicted RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 METRNQ9UJH8 293 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 R3HCC1Q9Y3T6 440 aaKnown RBP14.82□□□□□ -0.04
VPS29-201ENST00000360579 SNX9Q9Y5X1 595 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 KIAA1549LQ6ZVL6 1849 aa14.82□□□□□ -0.04
VPS29-201ENST00000360579 FREM2Q5SZK8 3169 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 A0A0A0MRY4 1105 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 TULP1O00294 542 aaPredicted RBP14.81□□□□□ -0.04
VPS29-201ENST00000360579 AP5Z1O43299 807 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 KAT7O95251 611 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 KLF8O95600 359 aaPredicted RBP14.81□□□□□ -0.04
VPS29-201ENST00000360579 BMP15O95972 392 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 ADH1CP00326 375 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 CYP17A1P05093 508 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 ANXA13P27216 316 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
VPS29-201ENST00000360579 SLC7A9P82251 487 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 GFPT1Q06210 699 aaPredicted RBP14.81□□□□□ -0.04
VPS29-201ENST00000360579 MYO1EQ12965 1108 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 DHCR24Q15392 516 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 GAB4Q2WGN9 574 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 FAM171BQ6P995 826 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 DENND5BQ6ZUT9 1274 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 ARMCX6Q7L4S7 300 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 FILIP1Q7Z7B0 1213 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 ADGRG2Q8IZP9 1017 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 CSGALNACT2Q8N6G5 542 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 RLN3Q8WXF3 142 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 TMEM74BQ9NUR3 256 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 RBAKQ9NYW8 714 aaPredicted RBP14.81□□□□□ -0.04
VPS29-201ENST00000360579 SEL1LQ9UBV2 794 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 PILRBQ9UKJ0 227 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 KLK13Q9UKR3 277 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 SLC6A14Q9UN76 642 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 TCHHQ07283 1943 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 THADAQ6YHU6 1953 aa14.81□□□□□ -0.04
VPS29-201ENST00000360579 SPAARA0A1B0GVQ0 90 aa14.8□□□□□ -0.04
VPS29-201ENST00000360579 FAM221BA6H8Z2 402 aa14.8□□□□□ -0.04
VPS29-201ENST00000360579 H3BQV1 296 aa14.8□□□□□ -0.04
VPS29-201ENST00000360579 SGK1O00141 431 aa14.8□□□□□ -0.04
VPS29-201ENST00000360579 OPHN1O60890 802 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms