RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 ZPBP2Q6X784 338 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 YTHDF3Q7Z739 585 aaKnown RBP12.78□□□□□ -0.36
COL20A1-201ENST00000358894 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 DNERQ8NFT8 737 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 COPS5Q92905 334 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 WNK4Q96J92 1243 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 APOBEC2Q9Y235 224 aaKnown RBP12.78□□□□□ -0.36
COL20A1-201ENST00000358894 INPP5FQ9Y2H2 1132 aa12.78□□□□□ -0.36
COL20A1-201ENST00000358894 CRCPO75575 148 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 ZWINTO95229 277 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 GH1P01241 217 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 MYL3P08590 195 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 PRPSAP1Q14558 356 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 C1orf146Q5VVC0 180 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 ARID3BQ8IVW6 561 aaPredicted RBP12.77□□□□□ -0.36
COL20A1-201ENST00000358894 MCUQ8NE86 351 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 NACA2Q9H009 215 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 DPP3Q9NY33 737 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 GRHL1Q9NZI5 618 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 STAP1Q9ULZ2 295 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.36
COL20A1-201ENST00000358894 STIP1P31948 543 aaKnown RBP12.77□□□□□ -0.36
COL20A1-201ENST00000358894 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 SNRNP27Q8WVK2 155 aaKnown RBP12.77□□□□□ -0.36
COL20A1-201ENST00000358894 TMEM176AQ96HP8 235 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 TMEM237Q96Q45 408 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 SIK2Q9H0K1 926 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 HEY2Q9UBP5 337 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 SHOC2Q9UQ13 582 aa12.77□□□□□ -0.36
COL20A1-201ENST00000358894 MAGEB2O15479 319 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 SLC25A27O95847 323 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 MIPP30301 263 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 CA8P35219 290 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 ELK3P41970 407 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 PTGIRP43119 386 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 AGGF1Q8N302 714 aaeCLIP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 SLITRK1Q96PX8 696 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 RPTORQ8N122 1335 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 CST3P01034 146 aaPredicted RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 INSRRP14616 1297 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 PGM1P36871 562 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 OAZ1P54368 228 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 BMPR2Q13873 1038 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 ZDHHC24Q6UX98 284 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 FASTKD5Q7L8L6 764 aaKnown RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 ZC3H3Q8IXZ2 948 aaKnown RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 OR6J1Q8NGC5 347 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
COL20A1-201ENST00000358894 SLCO1B3Q9NPD5 702 aa12.77□□□□□ -0.37
COL20A1-201ENST00000358894 LIASO43766 372 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 GAS2O43903 313 aaKnown RBP12.76□□□□□ -0.37
COL20A1-201ENST00000358894 DNAJC8O75937 253 aaPredicted RBP12.76□□□□□ -0.37
COL20A1-201ENST00000358894 EGFRP00533 1210 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 GSTA1P08263 222 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ADRA1DP25100 572 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 TAF12Q16514 161 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 BOLA3Q53S33 107 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 EFHC2Q5JST6 749 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 CATSPERGQ6ZRH7 1159 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 MTDHQ86UE4 582 aaKnown RBP12.76□□□□□ -0.37
COL20A1-201ENST00000358894 TCP10LQ8TDR4 215 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ATXN2LQ8WWM7 1075 aaKnown RBP12.76□□□□□ -0.37
COL20A1-201ENST00000358894 CENPTQ96BT3 561 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 BFARQ9NZS9 450 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
COL20A1-201ENST00000358894 B4GALT5O43286 388 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ATP6V1G2O95670 118 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 GHRP10912 638 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 KCNA2P16389 499 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 SULT1E1P49888 294 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 PEX5P50542 639 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 NDST1P52848 882 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 LRRN4Q8WUT4 740 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 PPP1R36Q96LQ0 422 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 CNPY3Q9BT09 278 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 SPC25Q9HBM1 224 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 RXFP1Q9HBX9 757 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 MYH1P12882 1939 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 DNAJC6O75061 913 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 LGR5O75473 907 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ZNF286BP0CG31 522 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 VDRP11473 427 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 MX2P20592 715 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 CCND1P24385 295 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 ABHD15Q6UXT9 468 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 AFAP1L2Q8N4X5 818 aa12.76□□□□□ -0.37
COL20A1-201ENST00000358894 GABPB2Q8TAK5 448 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms